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BaseInfo

ncRNA ID novel_gma_miR6477
Species Glycine max
Class miRNA
Genome position Chr4:39724256-39724336 [-]
Reference genome Glycine_max_v2.0
Source SRR1295524
Length 24
Mature sequence(if miRNA) 1 - AUGGAUAAGGAGAAUGAAGAAGGU - 24
Stem-loop(if miRNA) --    AAAG         -        U       CU GU
  CUUC    GUUUUUCUU UCUAUUUU UUUUUUA  U  A
  ||||    ||||||||| |||||||| |||||||  |  U
  GAAG    UAAGAGGAA AGGUAAGA AAAAGAU  A  G
UG    -AAG         U        U       UU AA
Stem-loop sequence CUUCAAAGGUUUUUCUUUCUAUUUUUUUUUUUACUUGUAUGAAAUUUAGAAAAUAGAAUGGAUAAGGAGAAUGAAGAAGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006573080.2
ncRNA:24   UGGAAGAAGUAAGAGGAAUAGGUA   1
  ||||||||||||||||||||||||
targets:1565   ACCUUCUUCAUUCUCCUUAUCCAU   1588

0.0 PREDICTED: Glycine max uncharacterized LOC102660841 (LOC102660841), transcript variant X1, mRNA uncharacterized LOC102660841(LOC102660841) coding protein psRNATarget
XM_006573081.2
ncRNA:24   UGGAAGAAGUAAGAGGAAUAGGUA   1
  ||||||||||||||||||||||||
targets:1478   ACCUUCUUCAUUCUCCUUAUCCAU   1501

0.0 PREDICTED: Glycine max uncharacterized LOC102660841 (LOC102660841), transcript variant X2, mRNA uncharacterized LOC102660841(LOC102660841) coding protein psRNATarget