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BaseInfo

ncRNA ID novel_gma_miR6473
Species Glycine max
Class miRNA
Genome position Chr3:8304342-8304413 [+]
Reference genome Glycine_max_v2.0
Source SRR1295524
Length 24
Mature sequence(if miRNA) 49 - ACUAGAGAUAGAGAGACUUAGCCU - 72
Stem-loop(if miRNA) --     UU   A         A   ----  G   ACA
  GUUGA  GUC UUUUGUUUC GGU    GA UCA   U
  |||||  ||| ||||||||| |||    || |||
  CGAUU  CAG GAGAUAGAG UCA    UU AGU   A
UC     --   A         A   UACC  G   AAU
Stem-loop sequence GUUGAUUGUCAUUUUGUUUCAGGUGAGUCAACAUAUAAUGAGUUCCAUACUAGAGAUAGAGAGACUUAGCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006575273.2
ncRNA:24   UCCGA--UUCAGAGAGAUAGAGAUCA   1
  |**||--|||||||||||||||||||
targets:109   ACUCUUCAAGUCUCUCUAUCUCUAGU   134

2.5 PREDICTED: Glycine max VQ motif-containing protein 9-like (LOC102665762), mRNA VQ motif-containing protein 9-like(LOC102665762) coding protein psRNATarget
BT097933.1
ncRNA:24   UCCGAUUCAGAGAGAUAGAGAUCA   1
  |*|*||||*=|||||||||||||*
targets:272   AAGAUAAGCUUCUCUAUCUCUAGC   295

3.0 Soybean clone JCVI-FLGm-11J10 unknown mRNA NA coding protein psRNATarget