| ncRNA ID | novel_gma_miR6472 |
| Species | Glycine max |
| Class | miRNA |
| Genome position | Chr3:8127263-8127480 [-] |
| Reference genome | Glycine_max_v2.0 |
| Source | SRR1295524 |
| Length | 24 |
| Mature sequence(if miRNA) | 195 - AAGAGGAGAAAGAGUCGUUAAGGC - 218 |
| Stem-loop(if miRNA) |
-- GA - - C G - GA C AAG UG -GC A --A G UG G - ---GA UG AAGAGGA AAGAG UCGU UAAGG GUU AAC CUU AAUGAU UUCUU UU AAAG AGAGA UC UUAAGGU U AAC ACCUUGA AAU CCUCU AU ||||||| ||||| |||| ||||| ||| ||| ||| |||||| ||||| || |||| ||||| || ||||||| | ||| ||||||| ||| ||||| |U UUUUUUU UUCUC AGCA GUUUC CAG UUG GGA UUGCUA AGGGA AA UUUU UCUCU AG AGUUCCA G UUG UGGAAUU UUA GGAGA UU AG AG U A - G C -A - GAA GU AGU - CAA G -- - G AGAGA GU |
| Stem-loop sequence | AAGAGGAGAAAGAGUCGUUAAGGCGUUGAACCUUGAAAUGAUCUUCUUAAGUUUGAAAGGCAGAGAAUCAUUAAGGUGUUGAACGACCUUGAAAUGACCUCUUGAUUUUUGAGAGGAGAGAAUUGUUAAGGUGUUGGACCUUGAAACGAUCUCUUGAUUUUUGAAAAGAGGGAAUCGUUAAGGCGUUGGACCUUUGAACGAUCUCUUGAUUUUUUUGA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK244815.1 |
|
2.5 | Glycine max cDNA, clone: GMFL01-14-I09 | NA | coding protein | psRNATarget | |||||||||
| XM_006598731.2 |
|
2.5 | PREDICTED: Glycine max regulator of nonsense transcripts UPF3-like (LOC100799816), mRNA | regulator of nonsense transcripts UPF3-like(LOC100799816) | coding protein | psRNATarget |