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BaseInfo

ncRNA ID novel_gma_miR6460
Species Glycine max
Class miRNA
Genome position Chr19:27292944-27292992 [+]
Reference genome Glycine_max_v2.0
Source SRR1295524
Length 24
Mature sequence(if miRNA) 26 - GUAGGGAGAAUGAAUUUUGGUGAA - 49
Stem-loop(if miRNA) --        A  -    G G   A
  UAUCAAAG UC UUCU U UGC G
  |||||||| || |||| | |||
  GUGGUUUU AG AAGA G AUG A
AA        A  U    G G   A
Stem-loop sequence UAUCAAAGAUCUUCUGUGUGCAGAAGUAGGGAGAAUGAAUUUUGGUGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003527902.3
ncRNA:24   AAGUGGUUUUAAGUAAGAGGGAUG   1
  ||=-||||||*||||||||=||||
targets:2012   UUU-CCAAAAAUCAUUCUCUCUAC   2034

2.5 PREDICTED: Glycine max protein translocase subunit SECA2, chloroplastic (LOC100793437), transcript variant X3, mRNA protein translocase subunit SECA2, chloroplastic(LOC100793437) coding protein psRNATarget