ncRNA ID | novel_gma_miR6458 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr19:11423150-11423349 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295524 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGUGUAUGCAUGAUGAACCUUGAC - 24 |
Stem-loop(if miRNA) |
--           G      C             C      A                U       C     U       AUU                    AGUGUAUGCAU AUGAAC UUGACAUCGGUUU UCUAGU AAAUCGAUGUUAAUGU AUAUAUU ACAUU GUUUUGU   AAAACCGAUGUUAAUGUA   ||||||||||| |||||| ||||||||||||| |||||| |||||||||||||||| ||||||| ||||| |||||||   |||||||||||||||||A   UCACAUACGUA UACUUG AACUGUAGCCAAA AGAUCA UUUGGCUACAAUUACA UAUAUAA UGUAG CAAAACG   UUUUGGCUACAAUUAUAU AU           G      C             -      C                U       U     C       AUC                  |
Stem-loop sequence | AGUGUAUGCAUGAUGAACCUUGACAUCGGUUUCUCUAGUAAAAUCGAUGUUAAUGUUAUAUAUUCACAUUUGUUUUGUAUUAAAACCGAUGUUAAUGUAAUAUAUUAACAUCGGUUUUCUAGCAAAACCGAUGUUAAUAUAUUACAUUAACAUCGGUUUCACUAGAAAACCGAUGUCAACGUUCAUGAUGCAUACACUUA |