ncRNA ID | novel_gma_miR6444 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:10369403-10369544 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295524 |
Length | 24 |
Mature sequence(if miRNA) | 119 - AGGAGGAACAUGCACGGAUUGGUG - 142 |
Stem-loop(if miRNA) |
--           UUC      G        G                  A     U                 CCAAUCUGUGC   UUCCUC UCUACCAG UCAAUAUCUUUCCUUUCA CUUUU UUUUUGUAAAUUACA   |||||||||||   |||||| |||||||| |||||||||||||||||| ||||| ||||||||||||||G   GGUUAGGCACG   AAGGAG AGAUGGUC AGUUAUAGAAAGGAAAGU GGAAA GAAAACAUUUGAUGU GU           UAC      G        G                  -     C               |
Stem-loop sequence | CCAAUCUGUGCUUCUUCCUCGUCUACCAGGUCAAUAUCUUUCCUUUCAACUUUUUUUUUUGUAAAUUACAGUGUAGUUUACAAAAGCAAAGGUGAAAGGAAAGAUAUUGAGCUGGUAGAGGAGGAACAUGCACGGAUUGGUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT090376.1 |
|
2.5 | Soybean clone JCVI-FLGm-4G12 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
NM_001250154.1 |
|
2.5 | Glycine max uncharacterized LOC100306327 (LOC100306327), mRNA | uncharacterized LOC100306327(LOC100306327) | coding protein | psRNATarget |