ncRNA ID | novel_gma_miR6440 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:22040234-22040432 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295524;SRR1295525 |
Length | 24 |
Mature sequence(if miRNA) | 176 - AGUGUAUGCAUGAUGAACCUUGAC - 199 |
Stem-loop(if miRNA) |
--           G      C         A         A                U       C           -  A UA     -A             AGUGUAUGCAU AUGAAC UUGACAUCG UUUUCUAGU AAACCGAUGUUAAUGU AUAUAUU ACAUCGGUUUU CU G  AAAAC  AUGUUAAUGUA   ||||||||||| |||||| ||||||||| ||||||||| |||||||||||||||| ||||||| ||||||||||| || |  |||||  ||||||||||A   UCACAUACGUA UACUUG AACUGUAGC AAAAGAUCA UUUGGCUACAAUUACA UAUAUAA UGUAGCCAAAA GA C  UUUUG  UACAAUUAUAU AU           G      C         C         C                U       U           C  A --     GC           |
Stem-loop sequence | AGUGUAUGCAUGAUGAACCUUGACAUCGAUUUUCUAGUAAAACCGAUGUUAAUGUUAUAUAUUCACAUCGGUUUUCUAGUAAAAACAAUGUUAAUGUAAUAUAUUAACAUCGGUUUUCAAGCAAAACCGAUGUUAAUAUAUUACAUUAACAUCGGUUUCACUAGAAAACCGAUGUCAACGUUCAUGAUGCAUACACUUA |