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BaseInfo

ncRNA ID novel_gma_miR6439
Species Glycine max
Class miRNA
Genome position Chr17:37930906-37930994 [+]
Reference genome Glycine_max_v2.0
Source SRR1295524
Length 24
Mature sequence(if miRNA) 66 - GAGAAUUGAUGUUGAGUGUAGUGC - 89
Stem-loop(if miRNA) --                     ACU      U        -  G
  AUUGUACUCAACAUCAGUUUU   UAGAAU GAUGUUGA GU U
  |||||||||||||||||||||   |||||| |||||||| || C
  UGAUGUGAGUUGUAGUUAAGA   AUUUUG CUACAACU CG G
CG                     -GU      U        G  U
Stem-loop sequence AUUGUACUCAACAUCAGUUUUACUUAGAAUUGAUGUUGAGUGUCGUGCGUCAACAUCUGUUUUAUGAGAAUUGAUGUUGAGUGUAGUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003533111.3
ncRNA:24   CGU---GAUGUGAGUUGUAGUUAAGAG   1
  *||---|||*||||||*||||||||||
targets:1306   UCAAUUCUAGACUCAAAAUCAAUUCUC   1332

2.5 PREDICTED: Glycine max putative septum site-determining protein minD homolog, chloroplastic (LOC100802499), mRNA putative septum site-determining protein minD homolog, chloroplastic(LOC100802499) coding protein psRNATarget