ncRNA ID | novel_gma_miR6439 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:37930906-37930994 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295524 |
Length | 24 |
Mature sequence(if miRNA) | 66 - GAGAAUUGAUGUUGAGUGUAGUGC - 89 |
Stem-loop(if miRNA) |
--                     ACU      U        -  G   AUUGUACUCAACAUCAGUUUU   UAGAAU GAUGUUGA GU U   |||||||||||||||||||||   |||||| |||||||| || C   UGAUGUGAGUUGUAGUUAAGA   AUUUUG CUACAACU CG G CG                     -GU      U        G  U |
Stem-loop sequence | AUUGUACUCAACAUCAGUUUUACUUAGAAUUGAUGUUGAGUGUCGUGCGUCAACAUCUGUUUUAUGAGAAUUGAUGUUGAGUGUAGUGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003533111.3 |
|
2.5 | PREDICTED: Glycine max putative septum site-determining protein minD homolog, chloroplastic (LOC100802499), mRNA | putative septum site-determining protein minD homolog, chloroplastic(LOC100802499) | coding protein | psRNATarget |