Search result

BaseInfo

ncRNA ID	novel_gma_miR6436
Species	Glycine max
Class	miRNA
Genome position	Chr17:22497711-22497851 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1295524
Length	24
Mature sequence(if miRNA)	118 - AGGAGGAACAUGCACGGAUUGGUG - 141
Stem-loop(if miRNA)	--           UUC      G        G                  A          -GU          CCAAUCUGUGC   UUCCUC UCUAUCAG UCAAUAUCUUUCCUUUCA CUUUUGUUUU   AAAUUAUA   |||||||||||   |||||| |||||||| |||||||||||||||||| ||||||||||   |||||||G   GGUUAGGCACG   AAGGAG AGAUGGUC AGUUAUAGAAAGGAAAGU GGAAACGAAA   UUUGAUGU GU           UAC      G        G                  -          ACU
Stem-loop sequence	CCAAUCUGUGCUUCUUCCUCGUCUAUCAGGUCAAUAUCUUUCCUUUCAACUUUUGUUUUGUAAAUUAUAGUGUAGUUUUCAAAAGCAAAGGUGAAAGGAAAGAUAUUGAGCUGGUAGAGGAGGAACAUGCACGGAUUGGUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT090376.1	ncRNA:24   GUGGUUAGGCACGUACAAGGAGGA   1   =|===||||*|||||||||||*|| targets:214   UAUUGAUCCUUGCAUGUUCCUACU   237 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-4G12 unknown mRNA	NA	coding protein	psRNATarget
NM_001250154.1	ncRNA:24   GUGGUUAGGCACGUACAAGGAGGA   1   =|===||||*|||||||||||*|| targets:214   UAUUGAUCCUUGCAUGUUCCUACU   237 Target Full Sequence	2.5	Glycine max uncharacterized LOC100306327 (LOC100306327), mRNA	uncharacterized LOC100306327(LOC100306327)	coding protein	psRNATarget