ncRNA ID | novel_gma_miR6434 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr16:3536287-3536510 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295524;SRR1295525 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUCUCAAAAACAUUGUCCUCCUCU - 24 |
Stem-loop(if miRNA) |
--     A UG    G         U   A          A      C    U  G       C      --A     C            G                AUA  G   AGGAG A  GUGU UUUGAGAUU CUU AUUGUCUUUC UAUCAU CACA AA UUGUUUC CUUUCU   CUCUA UAAAUAAAGUUU UAUUUCACCAUUCAUA   UU A   ||||| |  |||| ||||||||| ||| |||||||||| |||||| |||| || ||||||| ||||||   ||||| |||||||||||| ||||||||||||||||   ||   UCCUC U  UACA AAACUCUAA GAA UGACGGAAAG AUAGUA GUGU UU AACGAGG GAAAGA   GAGAU GUUUAUUUUAAA AUAAAGUGGUAGGUAU   AG C UC     C GU    A         C   C          C      A    U  G       A      GAG     A            G                --G  A |
Stem-loop sequence | AGGAGAAUGGUGUGUUUGAGAUUUCUUAAUUGUCUUUCAUAUCAUCCACAUAAGUUGUUUCCCUUUCUACUCUACUAAAUAAAGUUUGUAUUUCACCAUUCAUAAUAUUGACAGAGUAUGGAUGGUGAAAUAGAAAUUUUAUUUGAUAGAGGAGAGAAAGAGGAGCAAGUUUUGUGAAUGAUACGAAAGGCAGUCAAGCAAUCUCAAAAACAUUGUCCUCCUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003519637.3 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100806244 (LOC100806244), mRNA | uncharacterized LOC100806244(LOC100806244) | coding protein | psRNATarget |