ncRNA ID | novel_gma_miR6425 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr8:39813703-39813856 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295524 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGGGAGAAAGAAAAGUUGAAGAAA - 24 |
Stem-loop(if miRNA) |
AG      AGAAA      A   AUGUUUCUCAACUGGGACAAGGAAAAAUGAAGAAAUGAGCUCUCUCUAUAUAGGGAG   GGAGAA     AGUUGA GAA                                                         U   ||||||     |||||| |||   CUUCUU     UCCUUU UUU                                                         G --      -----      -   UUCUUUUUUUUCCGAAGUUCAGGUUGUAGCGAGUUCUAUUUAUGAACUUAUCACAAA |
Stem-loop sequence | AGGGAGAAAGAAAAGUUGAAGAAAUGUUUCUCAACUGGGACAAGGAAAAAUGAAGAAAUGAGCUCUCUCUAUAUAGGGAGUGAAACACUAUUCAAGUAUUUAUCUUGAGCGAUGUUGGACUUGAAGCCUUUUUUUUCUUUUUUUUCCUUUCUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006590815.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100783658 (LOC100783658), transcript variant X1, mRNA | uncharacterized LOC100783658(LOC100783658) | coding protein | psRNATarget | |||||||||
XM_006590816.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100783658 (LOC100783658), transcript variant X2, mRNA | uncharacterized LOC100783658(LOC100783658) | coding protein | psRNATarget |