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BaseInfo

ncRNA ID novel_gma_miR6424
Species Glycine max
Class miRNA
Genome position Chr8:34809366-34809426 [+]
Reference genome Glycine_max_v2.0
Source SRR1295524
Length 24
Mature sequence(if miRNA) 38 - AAUCAAGUUGAUCCGUAAAAGACU - 61
Stem-loop(if miRNA) --CAA                  C      
     UUUGCGGAUCAACUUGAU CGUAAGA
     |||||||||||||||||| ||||||A
     AAAUGCCUAGUUGAACUA GCAUUCG
UCAGA                  A      
Stem-loop sequence CAAUUUGCGGAUCAACUUGAUCCGUAAGAAGCUUACGAAUCAAGUUGAUCCGUAAAAGACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006590625.2
ncRNA:24   UCAGAAAAUGCCUAGUUGAACUAA   1
  |||-|*||==||||||||||||||
targets:1720   AGU-UGUUGUGGAUCAACUUGAUU   1742

3.0 PREDICTED: Glycine max nucleolar protein 6-like (LOC100776157), transcript variant X2, mRNA nucleolar protein 6-like(LOC100776157) coding protein psRNATarget
XM_003537540.3
ncRNA:24   UCAGAAAAUGCCUAGUUGAACUAA   1
  |||-|*||==||||||||||||||
targets:1720   AGU-UGUUGUGGAUCAACUUGAUU   1742

3.0 PREDICTED: Glycine max nucleolar protein 6-like (LOC100776157), transcript variant X1, mRNA nucleolar protein 6-like(LOC100776157) coding protein psRNATarget