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ncRNA ID novel_gma_miR6417
Species Glycine max
Class miRNA
Genome position Chr7:12948552-12948749 [+]
Reference genome Glycine_max_v2.0
Source SRR1295524
Length 24
Mature sequence(if miRNA) 1 - AGUGUAUGCAUGAUGAACCUUGAC - 24
Stem-loop(if miRNA) --           G      C    C    AU        A                U       C      A      -  U           C  U UA
  AGUGUAUGCAU AUGAAC UUGA AUCG  UUUCUAGU AAACUGAUGUUAAUGU AUAUAUU AUAUCG UUUUGU AG AAAACCGAUGU AA G  A
  ||||||||||| |||||| |||| ||||  |||||||| |||||||||||||||| ||||||| |||||| |||||| || ||||||||||| || |
  UCACAUACGUA UACUUG AACU UAGC  AAAGAUCA UUUGGCUACAAUUACA UAUAUAA UGUAGC AAAACG UC UUUUGGCUACA UU C  U
AU           G      C    A    -C        C                U       U      C      A  -           A  - UA
Stem-loop sequence AGUGUAUGCAUGAUGAACCUUGACAUCGAUUUUCUAGUAAAACUGAUGUUAAUGUUAUAUAUUCAUAUCGAUUUUGUAGUAAAACCGAUGUCAAUGUAAUAUCUUAACAUCGGUUUUCUAGCAAAACCGAUGUUAAUAUAUUACAUUAACAUCGGUUUCACUAGAAACCGAUAUCAACGUUCAUGAUGCAUACACUUA