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BaseInfo

ncRNA ID	novel_gma_miR6412
Species	Glycine max
Class	miRNA
Genome position	Chr17:5925944-5926095 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1295523;SRR1294474
Length	24
Mature sequence(if miRNA)	129 - AUUGCUGUGCCAGAUCUGAGCCUC - 152
Stem-loop(if miRNA)	--    U    G G   -  -C     -    C    CCGUC     U C     ---      GCG      UU     U   GGUU CGGA U UGG AC  CGAUG GAUC GUCG     AAACA C UCGCC   GGUGGC   GCAACG  AUCGG U   |||| |||| | ||| ||  ||||| |||| ||||     ||||| | |||||   ||||||   ||||||  |||||   CCGA GUCU A ACC UG  GUUAC CUAG CAGC     UUUGU G GGCGG   CUACCG   CGUUGC  UAGUU U CU    -    - G   G  UC     U    C    AAUUU     U U     UAC      --A      UU     U
Stem-loop sequence	GGUUUCGGAGUGUGGACCCGAUGGAUCCGUCGCCGUCAAACAUCCUCGCCGGUGGCGCGGCAACGUUAUCGGUUUUUUGAUUUCGUUGCAGCCAUCCAUGGCGGUGUUGUUUUUUAACGACCGAUCUCAUUGCUGUGCCAGAUCUGAGCCUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001251124.2	ncRNA:24   CUCCGAGUCUAGACCGUGUCGUUA   1   |=||-|||||*||||||*|||||| targets:670   GGGG-UCAGAACUGGCAGAGCAAU   692 Target Full Sequence	2.5	Glycine max uncharacterized LOC100527059 (LOC100527059), mRNA	uncharacterized LOC100527059(LOC100527059)	coding protein	psRNATarget
BT091870.1	ncRNA:24   CUCCGAGUCUAGACCGUGUCGUUA   1   |=||-|||||*||||||*|||||| targets:672   GGGG-UCAGAACUGGCAGAGCAAU   694 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-9C9 unknown mRNA	NA	coding protein	psRNATarget
XM_003522231.3	ncRNA:24   CUCC-----GAGUCUAGACCGUGUCGUUA   1   *|||-----||=|*||||||||||||||* targets:788   CAGGAUUGCCUUACAUCUGGCACAGCAAA   816 Target Full Sequence	3.0	PREDICTED: Glycine max UDP-arabinopyranose mutase 3-like (LOC100778301), mRNA	UDP-arabinopyranose mutase 3-like(LOC100778301)	coding protein	psRNATarget
AK244661.1	ncRNA:24   CUCC-----GAGUCUAGACCGUGUCGUUA   1   *|||-----||=|*||||||||||||||* targets:906   CAGGAUUGCCUUACAUCUGGCACAGCAAA   934 Target Full Sequence	3.0	Glycine max cDNA, clone: GMFL01-09-P07	NA	coding protein	psRNATarget
XM_003527070.2	ncRNA:24   CUCC-----GAGUCUAGACCGUGUCGUUA   1   *|||-----||=|*||||||||||||||* targets:899   CAGGAUUGCCUUACAUCUGGCACAGCAAA   927 Target Full Sequence	3.0	PREDICTED: Glycine max UDP-arabinopyranose mutase 3 (LOC100816315), mRNA	UDP-arabinopyranose mutase 3(LOC100816315)	coding protein	psRNATarget