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BaseInfo

ncRNA ID	novel_gma_miR6410
Species	Glycine max
Class	miRNA
Genome position	Chr10:43514602-43514814 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1295523
Length	22
Mature sequence(if miRNA)	1 - AAACUUAUCCCUUUUAGUCCCU - 22
Stem-loop(if miRNA)	--                    C                           C A                                         A AA       A   AAACUUAUCCCUUUUAGUCC UAUAGUUAAUAGGUGGAUUUUUUAGUC C GAAGUUUAUAUUUUAAUUCCCAAAAGGUCUCUGCUGUUAAA U  UUUAACU A   |||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |  ||||||| C   UUUGAAUAGGGAAAAUCAGG AUAUCAAUUAUUCAUCUAAAAAAUCAG G UUUCAAAUGUAAAAUUAAGGGUUUUCCAGAGACGGCAAUUU A  AAAUUGA A GG                    A                           A A                                         A GA       G
Stem-loop sequence	AAACUUAUCCCUUUUAGUCCCUAUAGUUAAUAGGUGGAUUUUUUAGUCCCAGAAGUUUAUAUUUUAAUUCCCAAAAGGUCUCUGCUGUUAAAAUAAUUUAACUAACAGAGUUAAAAGAAUUUAACGGCAGAGACCUUUUGGGAAUUAAAAUGUAAACUUUAGAGACUAAAAAAUCUACUUAUUAACUAUAAGGACUAAAAGGGAUAAGUUUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003538918.3	ncRNA:22   UCCCUGAUUUUCCCUAUUCAAA   1   ***|||*|=||||||||||||| targets:714   UUUGACAAGAAGGGAUAAGUUU   735 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100812718 (LOC100812718), transcript variant X4, mRNA	uncharacterized LOC100812718(LOC100812718)	coding protein	psRNATarget
XM_006590744.2	ncRNA:22   UCCCUGAUUUUCCCUAUUCAAA   1   ***|||*|=||||||||||||| targets:715   UUUGACAAGAAGGGAUAAGUUU   736 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100812718 (LOC100812718), transcript variant X3, mRNA	uncharacterized LOC100812718(LOC100812718)	coding protein	psRNATarget
XM_006590742.2	ncRNA:22   UCCCUGAUUUUCCCUAUUCAAA   1   ***|||*|=||||||||||||| targets:715   UUUGACAAGAAGGGAUAAGUUU   736 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100812718 (LOC100812718), transcript variant X1, mRNA	uncharacterized LOC100812718(LOC100812718)	coding protein	psRNATarget
XM_006590743.2	ncRNA:22   UCCCUGAUUUUCCCUAUUCAAA   1   ***|||*|=||||||||||||| targets:729   UUUGACAAGAAGGGAUAAGUUU   750 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100812718 (LOC100812718), transcript variant X2, mRNA	uncharacterized LOC100812718(LOC100812718)	coding protein	psRNATarget