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BaseInfo

ncRNA ID	novel_gma_miR6404
Species	Glycine max
Class	miRNA
Genome position	Chr9:4893703-4893822 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1295522
Length	24
Mature sequence(if miRNA)	97 - GGACCGAUGUAGAAUGCUGAGCAU - 120
Stem-loop(if miRNA)	--                       -------    --AA          CAACA    ACA  GG   GUUCAGCAUUCUACAUCGGUCCU       UGAU    GUAGAAUAUU     UUCU   UC  U   |||||||||||||||||||||||       ||||    ||||||||||     ||||   ||   CGAGUCGUAAGAUGUAGCCAGGA       ACUG    CAUCUUAUAG     AGGA   AG  U UA                       AGUCUAC    GCAG          ---CA    ACG  AU
Stem-loop sequence	GUUCAGCAUUCUACAUCGGUCCUUGAUAAGUAGAAUAUUCAACAUUCUACAUCGGUUUAGAGCAAGGAACGAUAUUCUACGACGGUCACAUCUGAAGGACCGAUGUAGAAUGCUGAGCAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006598094.2	ncRNA:24   UACGAGUCGUAAGAUGUAGCCAGG   1   ||||*=|||||||||||||||||| targets:929   AUGCAUAGCAUUCUACAUCGGUCC   952 Target Full Sequence	1.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X20, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768221.1	ncRNA:24   UACGAGUCGUAAGAUGUAGCCAGG   1   ||||*=|||||||||||||||||| targets:1042   AUGCAUAGCAUUCUACAUCGGUCC   1065 Target Full Sequence	1.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X21, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768217.1	ncRNA:24   UACGAGUCGUAAGAUGUAGCCAGG   1   ||||*=|||||||||||||||||| targets:1202   AUGCAUAGCAUUCUACAUCGGUCC   1225 Target Full Sequence	1.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X9, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768216.1	ncRNA:24   UACGAGUCGUAAGAUGUAGCCAGG   1   ||||*=|||||||||||||||||| targets:1479   AUGCAUAGCAUUCUACAUCGGUCC   1502 Target Full Sequence	1.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X8, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768212.1	ncRNA:24   UACGAGUCGUAAGAUGUAGCCAGG   1   ||||*=|||||||||||||||||| targets:1642   AUGCAUAGCAUUCUACAUCGGUCC   1665 Target Full Sequence	1.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X1, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget