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BaseInfo

ncRNA ID	novel_gma_miR6403
Species	Glycine max
Class	miRNA
Genome position	Chr8:18692782-18692875 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1295522
Length	24
Mature sequence(if miRNA)	71 - AAUUAGAAUAUGACACGUGACAGU - 94
Stem-loop(if miRNA)	--                       GAU    ACUCC      --     AA   UGUCACGUGUCAUGUUCUGAUUG   GUCA     AUGAAA  GAUAA  U   |||||||||||||||||||||||   ||||     ||||||  |||||   ACAGUGCACAGUAUAAGAUUAAC   UAGU     UACUUU  UUGUU  G UG                       ---    -----      UG     AC
Stem-loop sequence	UGUCACGUGUCAUGUUCUGAUUGGAUGUCAACUCCAUGAAAGAUAAAAUGCAUUGUUGUUUUCAUUGAUCAAUUAGAAUAUGACACGUGACAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK245140.1	ncRNA:24   UGACAGUGCACAGUAUAAGAUUAA   1   |||||||||||||||||||||||| targets:1508   ACUGUCACGUGUCAUAUUCUAAUU   1531 Target Full Sequence	0.0	Glycine max cDNA, clone: GMFL01-21-P01	NA	coding protein	psRNATarget
XM_006602607.2	ncRNA:24   UGACAGUGCACAGUAUAAGAUUAA   1   |=|||||||||||||||||||||| targets:566   AUUGUCACGUGUCAUAUUCUAAUU   589 Target Full Sequence	0.0	PREDICTED: Glycine max transcription factor TGA7-like (LOC100794752), mRNA	transcription factor TGA7-like(LOC100794752)	coding protein	psRNATarget
HI410444.1	ncRNA:24   UGACAGUGCACAGUAUAAGAUUAA   1   |||||||||||||||=|||||||| targets:16   ACUGUCACGUGUCAUGUUCUAAUU   39 Target Full Sequence	1.5	Sequence 8569 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242574.1	ncRNA:24   UGACAGUGCACAGUAUAAGAUUAA   1   |||||||||||||||=|||||||| targets:16   ACUGUCACGUGUCAUGUUCUAAUU   39 Target Full Sequence	1.5	Sequence 8569 from Patent EP2985353	NA	coding protein	psRNATarget
JB170905.1	ncRNA:24   UGACAGUGCACAGUAUAAGAUUAA   1   |||||||||||||||=|||||||| targets:16   ACUGUCACGUGUCAUGUUCUAAUU   39 Target Full Sequence	1.5	Sequence 8569 from Patent EP2559767	NA	coding protein	psRNATarget
HI410445.1	ncRNA:24   UGACAGUGCACAGUAUAAGAUUAA   1   |||||||||||||||=|||||||| targets:77   ACUGUCACGUGUCAUGUUCUAAUU   100 Target Full Sequence	1.5	Sequence 8570 from Patent EP2074227	NA	coding protein	psRNATarget
JB170906.1	ncRNA:24   UGACAGUGCACAGUAUAAGAUUAA   1   |||||||||||||||=|||||||| targets:77   ACUGUCACGUGUCAUGUUCUAAUU   100 Target Full Sequence	1.5	Sequence 8570 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242575.1	ncRNA:24   UGACAGUGCACAGUAUAAGAUUAA   1   |||||||||||||||=|||||||| targets:77   ACUGUCACGUGUCAUGUUCUAAUU   100 Target Full Sequence	1.5	Sequence 8570 from Patent EP2985353	NA	coding protein	psRNATarget
AK286574.1	ncRNA:24   UGACAGUGCACAGUAUAAGAUUAA   1   |=|-|*||||||=||||||||||| targets:2094   AUU-UGACGUGUUAUAUUCUAAUU   2116 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-31-L18	NA	coding protein	psRNATarget
XM_003545508.3	ncRNA:24   UGACAGUGCACAGUAUAAGAUUAA   1   |=|-|*||||||=||||||||||| targets:2076   AUU-UGACGUGUUAUAUUCUAAUU   2098 Target Full Sequence	2.5	PREDICTED: Glycine max 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 (LOC100777317), mRNA	3-hydroxy-3-methylglutaryl-coenzyme A reductase 1(LOC100777317)	coding protein	psRNATarget