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BaseInfo

ncRNA ID novel_gma_miR6398
Species Glycine max
Class miRNA
Genome position Chr6:22396834-22396920 [-]
Reference genome Glycine_max_v2.0
Source SRR1295522
Length 21
Mature sequence(if miRNA) 67 - ACCGGUAGUAAAUGGAUGCCU - 87
Stem-loop(if miRNA) --AC       A  U      CUC   UUGUGUGUCUGCUACC
    CGGUAGU AA GGAUGC   GAC                C
    ||||||| || ||||||   |||                C
    GUCAUCA UU CCUACG   CGU                C
UCUU       G  C      AAA   UGAAGUUAACGCGCUC
Stem-loop sequence ACCGGUAGUAAAUGGAUGCCUCGACUUGUGUGUCUGCUACCCCCCUCGCGCAAUUGAAGUUGCAAAGCAUCCCUUGACUACUGUUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003533750.3
ncRNA:21   UCCGUAGGUAAAUGAUGGCCA   1
  |||||||=|||*|||||||||
targets:1244   AGGCAUCUAUUGACUACCGGU   1264

2.5 PREDICTED: Glycine max auxin response factor 19-like (LOC100804628), mRNA auxin response factor 19-like(LOC100804628) coding protein psRNATarget