ncRNA ID | novel_gma_miR6394 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:15594830-15594887 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295522 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UUGGGUUGGAAUUGUGCUUAGC - 22 |
Stem-loop(if miRNA) |
--     UU           U    CACU   UUGGG  GGAAUUGUGCU AGCG    A   |||||  ||||||||||| ||||   GACUC  CCUUAACGCGA UCGU    A UG     UC           C    UCUU |
Stem-loop sequence | UUGGGUUGGAAUUGUGCUUAGCGCACUAAUUCUUGCUCAGCGCAAUUCCCUCUCAGGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003517759.1 |
|
2.5 | PREDICTED: Glycine max myb-related protein Zm38-like (LOC100785734), mRNA | myb-related protein Zm38-like(LOC100785734) | coding protein | psRNATarget | |||||||||
NM_001250398.1 |
|
2.5 | Glycine max WRKY21 (LOC732584), mRNA | WRKY21(LOC732584) | coding protein | psRNATarget | |||||||||
DQ322691.1 |
|
2.5 | Glycine max WRKY21 mRNA, complete cds | NA | coding protein | psRNATarget |