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BaseInfo

ncRNA ID novel_gma_miR6385
Species Glycine max
Class miRNA
Genome position Chr14:47353403-47353500 [+]
Reference genome Glycine_max_v2.0
Source SRR1295522
Length 22
Mature sequence(if miRNA) 1 - CUUCCGGAUGAACAAUUUGUUC - 22
Stem-loop(if miRNA) --                              U             AGA
  CUUCCGGAUGAACAAUUUGUUCUACCGAAA AACCUUCUUCCGG   A
  |||||||||||||||||||||||||||||| |||||||||||||
  GAAGGCCUAUUUGUUAAACAAGAUGGCUUU UUGGAAGAAGGCC   G
AA                              C             AUC
Stem-loop sequence CUUCCGGAUGAACAAUUUGUUCUACCGAAAUAACCUUCUUCCGGAGAAGCUACCGGAAGAAGGUUCUUUCGGUAGAACAAAUUGUUUAUCCGGAAGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006588641.2
ncRNA:22   CUUGUUUAACAAGUAGGCCUUC   1
  |||*||*||||||||||||||*
targets:162   GAAGAACUUGUUCAUCCGGAAA   183

3.0 PREDICTED: Glycine max uncharacterized LOC102667717 (LOC102667717), transcript variant X1, mRNA uncharacterized LOC102667717(LOC102667717) coding protein psRNATarget
XM_006588642.2
ncRNA:22   CUUGUUUAACAAGUAGGCCUUC   1
  |||*||*||||||||||||||*
targets:173   GAAGAACUUGUUCAUCCGGAAA   194

3.0 PREDICTED: Glycine max uncharacterized LOC102667717 (LOC102667717), transcript variant X2, mRNA uncharacterized LOC102667717(LOC102667717) coding protein psRNATarget