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BaseInfo

ncRNA ID novel_gma_miR6379
Species Glycine max
Class miRNA
Genome position Chr9:4190909-4191000 [-]
Reference genome Glycine_max_v2.0
Source SRR1292925
Length 24
Mature sequence(if miRNA) 1 - AAUGAGAACAUGACACGUGAUAGU - 24
Stem-loop(if miRNA) --      A      --   G     ---     GAAAA  A   UAUAU
  UGUCAC UGUCAU  UUU AUUGG   UCAAU     CA AAA     U
  |||||| ||||||  ||| |||||   |||||     || |||
  AUAGUG ACAGUA  AGA UAACC   AGUUA     GU UUU     U
UG      C      CA   G     UAC     ---AG  A   UCUAC
Stem-loop sequence UGUCACAUGUCAUUUUGAUUGGUCAAUGAAAACAAAAAUAUAUUUCAUCUUUUAUGGAAUUGACAUCCAAUGAGAACAUGACACGUGAUAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ242574.1
ncRNA:24   UGAUAGUGCACAGUACAAGAGUAA   1
  |||=||||||||||||||||*|||
targets:16   ACUGUCACGUGUCAUGUUCUAAUU   39

1.5 Sequence 8569 from Patent EP2985353 NA coding protein psRNATarget
JB170905.1
ncRNA:24   UGAUAGUGCACAGUACAAGAGUAA   1
  |||=||||||||||||||||*|||
targets:16   ACUGUCACGUGUCAUGUUCUAAUU   39

1.5 Sequence 8569 from Patent EP2559767 NA coding protein psRNATarget
HI410444.1
ncRNA:24   UGAUAGUGCACAGUACAAGAGUAA   1
  |||=||||||||||||||||*|||
targets:16   ACUGUCACGUGUCAUGUUCUAAUU   39

1.5 Sequence 8569 from Patent EP2074227 NA coding protein psRNATarget
LQ242575.1
ncRNA:24   UGAUAGUGCACAGUACAAGAGUAA   1
  |||=||||||||||||||||*|||
targets:77   ACUGUCACGUGUCAUGUUCUAAUU   100

1.5 Sequence 8570 from Patent EP2985353 NA coding protein psRNATarget
JB170906.1
ncRNA:24   UGAUAGUGCACAGUACAAGAGUAA   1
  |||=||||||||||||||||*|||
targets:77   ACUGUCACGUGUCAUGUUCUAAUU   100

1.5 Sequence 8570 from Patent EP2559767 NA coding protein psRNATarget
HI410445.1
ncRNA:24   UGAUAGUGCACAGUACAAGAGUAA   1
  |||=||||||||||||||||*|||
targets:77   ACUGUCACGUGUCAUGUUCUAAUU   100

1.5 Sequence 8570 from Patent EP2074227 NA coding protein psRNATarget