Search result

BaseInfo

ncRNA ID	novel_gma_miR6369
Species	Glycine max
Class	miRNA
Genome position	Chr18:44933223-44933272 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1295521
Length	21
Mature sequence(if miRNA)	30 - AUCAACUUGAUCUGGAAGAGU - 50
Stem-loop(if miRNA)	--           C      --A  A   AUCAACUUGAU UGGAAG   GU U   ||||||||||| ||||||   ||   UAGUUGAACUA GCCUUC   CA U CC           A      GAA  A
Stem-loop sequence	AUCAACUUGAUCUGGAAGAGUAUUAACAAGCUUCCGAAUCAAGUUGAUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006601583.1	ncRNA:21   UGAGAAGGUCUAGUUCAACUA   1   *=|||||*||||*|||||||| targets:262   CUUCUUCAAGAUGAAGUUGAU   282 Target Full Sequence	2.5	PREDICTED: Glycine max probable 26S protease subunit rpt4 (LOC100814975), mRNA	probable 26S protease subunit rpt4(LOC100814975)	coding protein	psRNATarget
AK285175.1	ncRNA:21   UGAGAAGGUCUAGUUCAACUA   1   *=|||||*||||*|||||||| targets:554   CUUCUUCAAGAUGAAGUUGAU   574 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-03-J23	NA	coding protein	psRNATarget
XM_003542405.3	ncRNA:21   UGAGAAGGUCUAGUUCAACUA   1   *=|||||*||||*|||||||| targets:597   CUUCUUCAAGAUGAAGUUGAU   617 Target Full Sequence	2.5	PREDICTED: Glycine max 26S proteasome regulatory subunit 4 homolog A (LOC100802442), mRNA	26S proteasome regulatory subunit 4 homolog A(LOC100802442)	coding protein	psRNATarget
AK243906.1	ncRNA:21   UGAGAAGGUCUAGUUCAACUA   1   *=|||||*||||*|||||||| targets:590   CUUCUUCAAGAUGAAGUUGAU   610 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-01-J07	NA	coding protein	psRNATarget
XM_003537112.3	ncRNA:21   UGAGAAGGUCUAGUUCAACUA   1   *=|||||*||||*|||||||| targets:600   CUUCUUCAAGAUGAAGUUGAU   620 Target Full Sequence	2.5	PREDICTED: Glycine max 26S proteasome regulatory subunit 4 homolog A (LOC100783293), mRNA	26S proteasome regulatory subunit 4 homolog A(LOC100783293)	coding protein	psRNATarget
XM_003521283.3	ncRNA:21   UGAGAAGGUCUAGUUCAACUA   1   *=|||||*||||*|||||||| targets:582   CUUCUUCAAGAUGAAGUUGAU   602 Target Full Sequence	2.5	PREDICTED: Glycine max 26S proteasome regulatory subunit 4 homolog A (LOC100798835), mRNA	26S proteasome regulatory subunit 4 homolog A(LOC100798835)	coding protein	psRNATarget
AK244682.1	ncRNA:21   UGAGAAGGUCUAGUUCAACUA   1   *=|||||*||||*|||||||| targets:531   CUUCUUCAAGAUGAAGUUGAU   551 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-10-I05	NA	coding protein	psRNATarget
XM_003554269.3	ncRNA:21   UGAGAAGGUCUAGUUCAACUA   1   *=|||||*||||*|||||||| targets:551   CUUCUUCAAGAUGAAGUUGAU   571 Target Full Sequence	2.5	PREDICTED: Glycine max 26S proteasome regulatory subunit 4 homolog A (LOC100776168), mRNA	26S proteasome regulatory subunit 4 homolog A(LOC100776168)	coding protein	psRNATarget