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BaseInfo

ncRNA ID novel_gma_miR6364
Species Glycine max
Class miRNA
Genome position Chr1:27780277-27780359 [-]
Reference genome Glycine_max_v2.0
Source SRR1295521
Length 24
Mature sequence(if miRNA) 60 - GAUUUCUAUUGUGGUUGUUGGCAA - 83
Stem-loop(if miRNA) -GAUU  UA                         C     U
     UC  UUGUGGUUGUUGGCAAAACCCUCAA GGAAU G
     ||  ||||||||||||||||||||||||| |||||
     AG  AACACCAACAACCGUUUUGGGAGUU CCUUA A
UGUUC  GC                         A     G
Stem-loop sequence GAUUUCUAUUGUGGUUGUUGGCAAAACCCUCAACGGAAUUGAGAUUCCAUUGAGGGUUUUGCCAACAACCACAACGGACUUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003553560.3
ncRNA:24   AACG-----GUUGUUGGUGUUAUCUUUAG   1
  *|||-----|||||||||=|||||||||=
targets:1131   AUGCUACCUCAACAACCAUAAUAGAAAUU   1159

2.5 PREDICTED: Glycine max B3 domain-containing protein At2g36080-like (LOC100781153), mRNA B3 domain-containing protein At2g36080-like(LOC100781153) coding protein psRNATarget