ncRNA ID | novel_gma_miR6359 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:40061509-40061616 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295521;SRR1295526 |
Length | 24 |
Mature sequence(if miRNA) | 85 - UAGGAGAGAGUUUUGGAACGAGAA - 108 |
Stem-loop(if miRNA) |
--           UU         A    --AA        -U   GUUAUCAUGG   UAGGAGAGAGU  UGGAACGAG AAUA    AAAAAGAG  UAU          U   |||||||||||  ||||||||| ||||    ||||||||  |||          A   AUUUUCUCUCA  ACUUUGUUC UUAU    UUUUUCUU  CGU          U UU           --         C    AAUC        UU   UUUUUUAUUU |
Stem-loop sequence | UAGGAGAGAGUUUUGGAACGAGAAAUAAAAAAAAGAGUUAUGUUAUCAUGGUAUUUUAUUUUUUUGCUUUUCUUUUUCUAAUAUUCCUUGUUUCAACUCUCUUUUAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014770031.1 |
|
2.5 | PREDICTED: Glycine max probable inactive receptor-like protein kinase At3g56050 (LOC100792450), transcript variant X2, mRNA | probable inactive receptor-like protein kinase At3g56050(LOC100792450) | coding protein | psRNATarget | |||||||||
XM_003518386.3 |
|
2.5 | PREDICTED: Glycine max probable inactive receptor-like protein kinase At3g56050 (LOC100792450), transcript variant X1, mRNA | probable inactive receptor-like protein kinase At3g56050(LOC100792450) | coding protein | psRNATarget |