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BaseInfo

ncRNA ID novel_gma_miR6359
Species Glycine max
Class miRNA
Genome position Chr1:40061509-40061616 [-]
Reference genome Glycine_max_v2.0
Source SRR1295521;SRR1295526
Length 24
Mature sequence(if miRNA) 85 - UAGGAGAGAGUUUUGGAACGAGAA - 108
Stem-loop(if miRNA) --           UU         A    --AA        -U   GUUAUCAUGG
  UAGGAGAGAGU  UGGAACGAG AAUA    AAAAAGAG  UAU          U
  |||||||||||  ||||||||| ||||    ||||||||  |||          A
  AUUUUCUCUCA  ACUUUGUUC UUAU    UUUUUCUU  CGU          U
UU           --         C    AAUC        UU   UUUUUUAUUU
Stem-loop sequence UAGGAGAGAGUUUUGGAACGAGAAAUAAAAAAAAGAGUUAUGUUAUCAUGGUAUUUUAUUUUUUUGCUUUUCUUUUUCUAAUAUUCCUUGUUUCAACUCUCUUUUAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014770031.1
ncRNA:24   AAGAGCAAGGUUUUGAGAGAGGAU   1
  *****|||||||||||=||||||*
targets:2026   CAGCAGUUCCAAAACUUUCUCCUC   2049

2.5 PREDICTED: Glycine max probable inactive receptor-like protein kinase At3g56050 (LOC100792450), transcript variant X2, mRNA probable inactive receptor-like protein kinase At3g56050(LOC100792450) coding protein psRNATarget
XM_003518386.3
ncRNA:24   AAGAGCAAGGUUUUGAGAGAGGAU   1
  *****|||||||||||=||||||*
targets:2079   CAGCAGUUCCAAAACUUUCUCCUC   2102

2.5 PREDICTED: Glycine max probable inactive receptor-like protein kinase At3g56050 (LOC100792450), transcript variant X1, mRNA probable inactive receptor-like protein kinase At3g56050(LOC100792450) coding protein psRNATarget