ncRNA ID | novel_gma_miR6356 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr16:21797389-21797593 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295521 |
Length | 23 |
Mature sequence(if miRNA) | 183 - UAUAGGGACUAAAAGGGAUAAGU - 205 |
Stem-loop(if miRNA) |
--                                A  G       CUU    A    C        GC       A     AC       -          CU   UUAUCUCUUUUAGUUCCUAUAGUUAAUAAGUG AU UUUUAGU   UGAA UUUA AUUUUAAU  UCAAAAG UUCUU  CGUUAAA UUUUUUAACU  G   |||||||||||||||||||||||||||||||| || |||||||   |||| |||| ||||||||  ||||||| |||||  ||||||| ||||||||||   AAUAGGGAAAAUCAGGGAUAUCAAUUAUUCAU UA AAAAUCA   ACUU AAAU UAAAAUUA  AGUUUUU AGGAA  GUAAUUU AAGAAAUUGG  U UG                                C  A       AGU    C    A        AA       C     CA       U          UA |
Stem-loop sequence | UUAUCUCUUUUAGUUCCUAUAGUUAAUAAGUGAAUGUUUUAGUCUUUGAAAUUUACAUUUUAAUGCUCAAAAGAUUCUUACCGUUAAAUUUUUUAACUCUGUAUGGUUAAAGAAUUUUAAUGACAAGGACUUUUUGAAAAUUAAAAUAUAAACUUCAUGAACUAAAAAAUCUACUUAUUAACUAUAGGGACUAAAAGGGAUAAGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014762229.1 |
|
2.5 | PREDICTED: Glycine max aldose 1-epimerase-like (LOC102668851), transcript variant X2, mRNA | aldose 1-epimerase-like(LOC102668851) | coding protein | psRNATarget | |||||||||
XM_014762228.1 |
|
2.5 | PREDICTED: Glycine max aldose 1-epimerase-like (LOC102668851), transcript variant X1, mRNA | aldose 1-epimerase-like(LOC102668851) | coding protein | psRNATarget |