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BaseInfo

ncRNA ID	novel_gma_miR6355
Species	Glycine max
Class	miRNA
Genome position	Chr1:43555767-43555906 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1295521;SRR1451618;SRR1451624
Length	22
Mature sequence(if miRNA)	119 - CAAGUGGAGAAUGAUGAAGGCC - 140
Stem-loop(if miRNA)	--  A        U           ------                    UAAUUG   C  AA    --    C   CA GUGGAGAA GAUGAAGGCCU      AGAGACACUACUAAGAAUAU      UUG UG  GGCC  CAAA U   || |||||||| |||||||||||      ||||||||||||||||||||      ||| ||  ||||  ||||   GU CACCUCUU CUAUUUCCGGG      UCUCUGUGAUGAUUCUUGUA      AAC AU  CCGG  GUUU A GG  C        C           UCUCCG                    ----UA   C  AC    AA    A
Stem-loop sequence	CAAGUGGAGAAUGAUGAAGGCCUAGAGACACUACUAAGAAUAUUAAUUGUUGCUGAAGGCCCAAACUAAUUUGAAGGCCCAUACCAAAUAUGUUCUUAGUAGUGUCUCUGCCUCUGGGCCUUUAUCCUUCUCCACCUGGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014778988.1	ncRNA:22   CC-GGAAGUAGUAAGAGGUGAAC   1   ||-|||||||||||||=|||||* targets:1665   GGACCUUCAUCAUUCUUCACUUA   1687 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100820089 (LOC100820089), transcript variant X2, mRNA	uncharacterized LOC100820089(LOC100820089)	coding protein	psRNATarget
XM_014769922.1	ncRNA:22   CC-GGAAGUAGUAAGAGGUGAAC   1   ||-=|||=||||||*|||||||| targets:3025   GGAUCUUUAUCAUUAUCCACUUG   3047 Target Full Sequence	2.5	PREDICTED: Glycine max serine/threonine-protein kinase STY8 (LOC100785569), transcript variant X2, mRNA	serine/threonine-protein kinase STY8(LOC100785569)	coding protein	psRNATarget
AK243942.1	ncRNA:22   CC-GGAAGUAGUAAGAGGUGAAC   1   ||-=|||=||||||*|||||||| targets:3236   GGAUCUUUAUCAUUAUCCACUUG   3258 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-01-K20	NA	coding protein	psRNATarget
XM_003550619.3	ncRNA:22   CC-GGAAGUAGUAAGAGGUGAAC   1   ||-=|||=||||||*|||||||| targets:3295   GGAUCUUUAUCAUUAUCCACUUG   3317 Target Full Sequence	2.5	PREDICTED: Glycine max serine/threonine-protein kinase STY8 (LOC100785569), transcript variant X1, mRNA	serine/threonine-protein kinase STY8(LOC100785569)	coding protein	psRNATarget
BT091005.1	ncRNA:22   CCGGAAGUAGUAAGAGGUGAAC   1   *|=|*||||||||||||*|||| targets:224   CGUCGUCAUCAUUCUCCUCUUG   245 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-6E1 unknown mRNA	NA	coding protein	psRNATarget