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BaseInfo

ncRNA ID novel_gma_miR6353
Species Glycine max
Class miRNA
Genome position Chr15:41356101-41356158 [+]
Reference genome Glycine_max_v2.0
Source SRR1295521
Length 23
Mature sequence(if miRNA) 36 - AGAGAAGAUAGAUAAGUUAGGCU - 58
Stem-loop(if miRNA) ----C      -      UA     -G    G
     AAUUUA CUAUUU  UCUCU  CAAA G
     |||||| ||||||  |||||  ||||
     UUGAAU GAUAGA  AGAGA  GUUU G
UCGGA      A      --     AG    A
Stem-loop sequence CAAUUUACUAUUUUAUCUCUGCAAAGGGAUUUGGAAGAGAAGAUAGAUAAGUUAGGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006593813.2
ncRNA:23   UCGGAU-UGAAUAGAUAGAAGAGA   1
  =*=|||-|=|||||||||||||||
targets:48   GAUCUACAUUUAUCUAUCUUCUCU   71

3.0 PREDICTED: Glycine max zinc finger protein CONSTANS-LIKE 9-like (LOC100800832), transcript variant X1, mRNA zinc finger protein CONSTANS-LIKE 9-like(LOC100800832) coding protein psRNATarget
XM_003542138.3
ncRNA:23   UCGGAU-UGAAUAGAUAGAAGAGA   1
  =*=|||-|=|||||||||||||||
targets:48   GAUCUACAUUUAUCUAUCUUCUCU   71

3.0 PREDICTED: Glycine max zinc finger protein CONSTANS-LIKE 9-like (LOC100800832), transcript variant X2, mRNA zinc finger protein CONSTANS-LIKE 9-like(LOC100800832) coding protein psRNATarget