ncRNA ID | novel_gma_miR6353 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr15:41356101-41356158 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295521 |
Length | 23 |
Mature sequence(if miRNA) | 36 - AGAGAAGAUAGAUAAGUUAGGCU - 58 |
Stem-loop(if miRNA) |
----C      -      UA     -G    G      AAUUUA CUAUUU  UCUCU  CAAA G      |||||| ||||||  |||||  ||||      UUGAAU GAUAGA  AGAGA  GUUU G UCGGA      A      --     AG    A |
Stem-loop sequence | CAAUUUACUAUUUUAUCUCUGCAAAGGGAUUUGGAAGAGAAGAUAGAUAAGUUAGGCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006593813.2 |
|
3.0 | PREDICTED: Glycine max zinc finger protein CONSTANS-LIKE 9-like (LOC100800832), transcript variant X1, mRNA | zinc finger protein CONSTANS-LIKE 9-like(LOC100800832) | coding protein | psRNATarget | |||||||||
XM_003542138.3 |
|
3.0 | PREDICTED: Glycine max zinc finger protein CONSTANS-LIKE 9-like (LOC100800832), transcript variant X2, mRNA | zinc finger protein CONSTANS-LIKE 9-like(LOC100800832) | coding protein | psRNATarget |