| ncRNA ID | novel_gma_miR6339 |
| Species | Glycine max |
| Class | miRNA |
| Genome position | Chr13:528280-528503 [+] |
| Reference genome | Glycine_max_v2.0 |
| Source | SRR1295521;SRR1292925;SRR1451610 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - UUUGGUCCCUGUAGUUUCAUGAUU - 24 |
| Stem-loop(if miRNA) |
-- CAU --CUUA CU A GUC - GAUUCUUA A U UUUGGUCCCUGUAGUUU GAUU CUUUUUUAGU UU UAGUUUGAAAGUG UUUUUAGUCUCUAUAGUUU CAU CUUUUUUAGUCCCU UAGUU U ||||||||||||||||| |||| |||||||||| || ||||||||||||| ||||||||||||||||||| ||| |||||||||||||| ||||| AAAUCAGGGAUAUCAAA CUAA GAGAAAAUCA GA AUCAAAUUUUCAC AAAAAUCAGGGAUAUCAAA GUA GAGAAAAUCAGGGA AUUAA C AA --U AAUUAA AU C AAU U -AAAUUAA C A |
| Stem-loop sequence | UUUGGUCCCUGUAGUUUCAUGAUUCUUACUUUUUUAGUCUUUAUAGUUUGAAAGUGGUCUUUUUAGUCUCUAUAGUUUCAUGAUUCUUACUUUUUUAGUCCCUAUAGUUUUCAAAUUACAGGGACUAAAAGAGAAUUAAAAUGUAAACUAUAGGGACUAAAAAUAACACUUUUAAACUACAGUAACUAAAAGAGAAUUAAAAUCUAAACUAUAGGGACUAAAAA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_006577048.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X1, mRNA | uncharacterized LOC100819268(LOC100819268) | coding protein | psRNATarget | |||||||||
| XM_014773932.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X2, mRNA | uncharacterized LOC100819268(LOC100819268) | coding protein | psRNATarget |