ncRNA ID | novel_gma_miR6326 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr7:25022477-25022668 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295521 |
Length | 23 |
Mature sequence(if miRNA) | 1 - CAAUUUUUCCUAAGAAUCGUCUU - 23 |
Stem-loop(if miRNA) |
--  A    -   UA        C      UCCUUCAUUUU         UUUU     ---AUA        -  A    CACAUAAAAACCGUCUUAGAAAG   CA UUUU UCC  AGAAUCGU UUAGAA           UUAUUUUUU    AAAAU      UUCUAAGA CG UUUU                       U   || |||| |||  |||||||| ||||||           |||||||||    |||||      |||||||| || ||||                       U   GU AAAA AGG  UCUUGGUA AAUCUU           AAUAAAAAA    UUUUA      AAGAUUCU UU AAGG                       A CU  C    C   -C        A      ----------U         UUUU     CCUAUA        U  -    AACCUUUUUAGUAGAAUCUUCAC |
Stem-loop sequence | CAAUUUUUCCUAAGAAUCGUCUUAGAAUCCUUCAUUUUUUAUUUUUUUUUUAAAAUAUAUUCUAAGACGAUUUUCACAUAAAAACCGUCUUAGAAAGUUACACUUCUAAGAUGAUUUUUCCAAGGAAUUUUCUUAGAAAUAUCCAUUUUUUUUAAAAAAUAAUUUCUAAAAUGGUUCUCGGACAAAACUGUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014770709.1 |
|
2.0 | PREDICTED: Glycine max cysteine-rich receptor-like protein kinase 25 (LOC102661673), mRNA | cysteine-rich receptor-like protein kinase 25(LOC102661673) | coding protein | psRNATarget |