ncRNA ID | novel_gma_miR6321 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr6:16498493-16498614 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1292925 |
Length | 23 |
Mature sequence(if miRNA) | 1 - GAAUAAAUUGUUCUAUCGGAAGA - 23 |
Stem-loop(if miRNA) |
--                     AU                CC          CCAA   A   UUCCGGUAGAACAAUUUGUUC  CCGGAAGAAUCUUCUU  GGAGAAGUUA    AAG A   |||||||||||||||||||||  ||||||||||||||||  ||||||||||    ||| C   AAGGCUAUCUUGUUAAAUAAG  GGUCUUCUUGGAAGAA  CCUCUUCGAU    UUC U AG                     AU                AA          -AGC   U |
Stem-loop sequence | UUCCGGUAGAACAAUUUGUUCAUCCGGAAGAAUCUUCUUCCGGAGAAGUUACCAAAAGAACUUCUUCGAUAGCUUCUCCAAAAGAAGGUUCUUCUGGUAGAAUAAAUUGUUCUAUCGGAAGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006591171.2 |
|
3.0 | PREDICTED: Glycine max endoribonuclease Dicer homolog 1-like (LOC102665293), transcript variant X1, mRNA | endoribonuclease Dicer homolog 1-like(LOC102665293) | coding protein | psRNATarget |