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BaseInfo

ncRNA ID novel_gma_miR6321
Species Glycine max
Class miRNA
Genome position Chr6:16498493-16498614 [-]
Reference genome Glycine_max_v2.0
Source SRR1292925
Length 23
Mature sequence(if miRNA) 1 - GAAUAAAUUGUUCUAUCGGAAGA - 23
Stem-loop(if miRNA) --                     AU                CC          CCAA   A
  UUCCGGUAGAACAAUUUGUUC  CCGGAAGAAUCUUCUU  GGAGAAGUUA    AAG A
  |||||||||||||||||||||  ||||||||||||||||  ||||||||||    ||| C
  AAGGCUAUCUUGUUAAAUAAG  GGUCUUCUUGGAAGAA  CCUCUUCGAU    UUC U
AG                     AU                AA          -AGC   U
Stem-loop sequence UUCCGGUAGAACAAUUUGUUCAUCCGGAAGAAUCUUCUUCCGGAGAAGUUACCAAAAGAACUUCUUCGAUAGCUUCUCCAAAAGAAGGUUCUUCUGGUAGAAUAAAUUGUUCUAUCGGAAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006591171.2
ncRNA:23   AGAAGGCUAUCUUGUUAAAUAAG   1
  *=|||=||*|||||||||||||*
targets:1452   GUUUCUGAAAGAACAAUUUAUUG   1474

3.0 PREDICTED: Glycine max endoribonuclease Dicer homolog 1-like (LOC102665293), transcript variant X1, mRNA endoribonuclease Dicer homolog 1-like(LOC102665293) coding protein psRNATarget