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BaseInfo

ncRNA ID novel_gma_miR6313
Species Glycine max
Class miRNA
Genome position Chr6:4705086-4705171 [-]
Reference genome Glycine_max_v2.0
Source SRR1295520
Length 23
Mature sequence(if miRNA) 1 - GCUCACUUCUCUUUCUGUCAACU - 23
Stem-loop(if miRNA) --         -    -        A        CU       G
  UUGACAGAA GAGA GUGAGCAC CAGAGGCA  UGGUAUA U
  ||||||||| |||| |||||||| ||||||||  ||||||| A
  AACUGUCUU CUCU CACUCGUG GUUUUCGU  AUCAUAU U
UC         U    U        C        -U       A
Stem-loop sequence UUGACAGAAGAGAGUGAGCACACAGAGGCACUUGGUAUAGUAUAUAUACUAUUGCUUUUGCGUGCUCACUUCUCUUUCUGUCAACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ242597.1
ncRNA:23   UCAACUGUCUUUCUCUUCACUCG   1
  |***|||||||||||*|||||||
targets:6   AACCGACAGAAAGAGUAGUGAGC   28

1.5 Sequence 8592 from Patent EP2985353 NA coding protein psRNATarget
HI410467.1
ncRNA:23   UCAACUGUCUUUCUCUUCACUCG   1
  |***|||||||||||*|||||||
targets:6   AACCGACAGAAAGAGUAGUGAGC   28

1.5 Sequence 8592 from Patent EP2074227 NA coding protein psRNATarget
JB170928.1
ncRNA:23   UCAACUGUCUUUCUCUUCACUCG   1
  |***|||||||||||*|||||||
targets:6   AACCGACAGAAAGAGUAGUGAGC   28

1.5 Sequence 8592 from Patent EP2559767 NA coding protein psRNATarget