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BaseInfo

ncRNA ID	novel_gma_miR6311
Species	Glycine max
Class	miRNA
Genome position	Chr3:13602819-13603016 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1295520
Length	24
Mature sequence(if miRNA)	1 - AUGGCAGCGGAAUGGAGAAAGAAG - 24
Stem-loop(if miRNA)	--  C                    C UC   C                       G                                   U      U   UC UUCUCCAUUCUGCUGCCAUU A  UUC AAGAAGCAAGGGAAUCCAUUGAU AAGAAGAUCCAAGGCCUACAAGCUCCAAUGGAGCU ACAUCA G   || |||||||||||||||||||| |  ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||   AG AAGAGGUAAGGCGACGGUAA U  AAG UUCUUCGUUUCCUUAGGUAACUA UUCUUCUAGGUUCCGGAUGUUCGAGGUUACCUCGA UGUAGU C GA  A                    U UU   -                       G                                   -      A
Stem-loop sequence	UCCUUCUCCAUUCUGCUGCCAUUCAUCUUCCAAGAAGCAAGGGAAUCCAUUGAUGAAGAAGAUCCAAGGCCUACAAGCUCCAAUGGAGCUUACAUCAUGCAUGAUGUAGCUCCAUUGGAGCUUGUAGGCCUUGGAUCUUCUUGAUCAAUGGAUUCCUUUGCUUCUUGAAUUUUAAUGGCAGCGGAAUGGAGAAAGAAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT095722.1	ncRNA:24   GAAGAAAGAGGUAAGGCGACGGUA   1   ||||*||||||||||||||||||| targets:37   CUUCCUUCUCCAUUCCGCUGCCAU   60 Target Full Sequence	0.0	Soybean clone JCVI-FLGm-15I19 unknown mRNA	NA	coding protein	psRNATarget
AK286453.1	ncRNA:24   GAA---GAAAGAGGUAAGGCGACGGUA   1   |||---||||||||||||||||||||| targets:1488   CUUUCCCUUUCUCCAUUCCGCUGCCAU   1514 Target Full Sequence	0.0	Glycine max cDNA, clone: GMFL01-28-L19	NA	coding protein	psRNATarget
XM_006587612.2	ncRNA:24   GAAGAAAGAGGUAAGGCGACGGUA   1   =**||||||||||||||||||||| targets:5   UCCCUUUCUCCAUUCCGCUGCCAU   28 Target Full Sequence	0.0	PREDICTED: Glycine max maltose excess protein 1, chloroplastic-like (LOC102668505), transcript variant X2, mRNA	maltose excess protein 1, chloroplastic-like(LOC102668505)	coding protein	psRNATarget
XM_006587611.2	ncRNA:24   GAAGAAAGAGGUAAGGCGACGGUA   1   =**||||||||||||||||||||| targets:10   UCCCUUUCUCCAUUCCGCUGCCAU   33 Target Full Sequence	0.0	PREDICTED: Glycine max maltose excess protein 1, chloroplastic-like (LOC102668505), transcript variant X1, mRNA	maltose excess protein 1, chloroplastic-like(LOC102668505)	coding protein	psRNATarget