ncRNA ID | novel_gma_miR6301 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:9379115-9379224 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295520 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UAAGACGAUUCCGAGGACAAAACC - 24 |
Stem-loop(if miRNA) |
--     CG  UC  A          AU          ----------C   C      G   UAAGA  AU  CG GGACAAAACC  CUUAGAAUGU           AGA GGUCUU A   |||||  ||  || ||||||||||  ||||||||||           ||| ||||||   GUUCU  UA  GU CCUGUUUUGG  GAAUCUUAUA           UCU CCAGAA U AA     AG  GA  C          CC          UCAUGUAAGAU   A      U |
Stem-loop sequence | UAAGACGAUUCCGAGGACAAAACCAUCUUAGAAUGUCAGACGGUCUUGAUUAAGACCAUCUUAGAAUGUACUAUAUUCUAAGCCGGUUUUGUCCCUGAGAUGAUCUUGAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003518469.3 |
|
3.0 | PREDICTED: Glycine max probable galacturonosyltransferase 15 (LOC100794379), transcript variant X1, mRNA | probable galacturonosyltransferase 15(LOC100794379) | coding protein | psRNATarget |