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BaseInfo

ncRNA ID novel_gma_miR6296
Species Glycine max
Class miRNA
Genome position Chr15:148707-148885 [+]
Reference genome Glycine_max_v2.0
Source SRR1295520
Length 24
Mature sequence(if miRNA) 1 - GAAGGUUGAUUGUCACGUGUCACU - 24
Stem-loop(if miRNA) --  AG      --                C     A                                ---      A   ACAAUAAUGCA
  GA  GUUGAU  UGUCACGUGUCACUUU UUAUU GAUGAUGAUUGUUACGUGUCAUGUUCUGAUUG   GUCAAU GAA           U
  ||  ||||||  |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||   |||||| |||
  CU  CAACUG  ACAGUGCACAGUGAAA AAUAA CUACUAUUGACAGUGCACAGUACAAGACUAAU   CAGUUG AGG           U
CA  -G      CC                A     C                                UUA      -   UACUUUCUACU
Stem-loop sequence GAAGGUUGAUUGUCACGUGUCACUUUCUUAUUAGAUGAUGAUUGUUACGUGUCAUGUUCUGAUUGGUCAAUAGAAACAAUAAUGCAUUUCAUCUUUCAUGGAGUUGACAUUUAAUCAGAACAUGACACGUGACAGUUAUCAUCCAAUAAAAAAGUGACACGUGACACCGUCAACGUCAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014762964.1
ncRNA:24   UCACUGUGCACUGUUAGUUGGAAG   1
  *||*||||*|||||||||||*|||
targets:830   UGUAACACAUGACAAUCAACGUUC   853

2.5 PREDICTED: Glycine max fasciclin-like arabinogalactan protein 1 (LOC106794953), mRNA fasciclin-like arabinogalactan protein 1(LOC106794953) coding protein psRNATarget