ncRNA ID | novel_gma_miR6295 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:16753089-16753232 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295520 |
Length | 22 |
Mature sequence(if miRNA) | 123 - UUAAAAGUUUUGUUUUGGGCCC - 144 |
Stem-loop(if miRNA) |
--               U   CC   ACCGCCA   A       ACA  A      UC    GA  GAUAUA   UUAAAAGUUUUGUUU GGG  CCU       AUU AGUGAUG   UG CAUCAU  CAAU  CU      U   ||||||||||||||| |||  |||       ||| |||||||   || ||||||  ||||  ||      A   AAUUUUCAAAACAAA CCC  GGA       UAA UCACUAC   AC GUGGUA  GUUG  GA      U AU               -   UA   ACAGUAG   A       CAC  C      GA    UC  GAAGGU |
Stem-loop sequence | UUAAAAGUUUUGUUUUGGGCCCCUACCGCCAAUUAAGUGAUGACAUGACAUCAUUCCAAUGACUGAUAUAUAUUGGAAGAGCUGUUGAGAUGGUGCCACACCAUCACUAAAUGAUGACAAGGAUCCCAAACAAAACUUUUAAUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006573081.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC102660841 (LOC102660841), transcript variant X2, mRNA | uncharacterized LOC102660841(LOC102660841) | coding protein | psRNATarget | |||||||||
XM_006573080.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC102660841 (LOC102660841), transcript variant X1, mRNA | uncharacterized LOC102660841(LOC102660841) | coding protein | psRNATarget |