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BaseInfo

ncRNA ID novel_gma_miR6295
Species Glycine max
Class miRNA
Genome position Chr14:16753089-16753232 [-]
Reference genome Glycine_max_v2.0
Source SRR1295520
Length 22
Mature sequence(if miRNA) 123 - UUAAAAGUUUUGUUUUGGGCCC - 144
Stem-loop(if miRNA) --               U   CC   ACCGCCA   A       ACA  A      UC    GA  GAUAUA
  UUAAAAGUUUUGUUU GGG  CCU       AUU AGUGAUG   UG CAUCAU  CAAU  CU      U
  ||||||||||||||| |||  |||       ||| |||||||   || ||||||  ||||  ||      A
  AAUUUUCAAAACAAA CCC  GGA       UAA UCACUAC   AC GUGGUA  GUUG  GA      U
AU               -   UA   ACAGUAG   A       CAC  C      GA    UC  GAAGGU
Stem-loop sequence UUAAAAGUUUUGUUUUGGGCCCCUACCGCCAAUUAAGUGAUGACAUGACAUCAUUCCAAUGACUGAUAUAUAUUGGAAGAGCUGUUGAGAUGGUGCCACACCAUCACUAAAUGAUGACAAGGAUCCCAAACAAAACUUUUAAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006573081.2
ncRNA:22   CCCGGGUUUUGUUUUGAAAAUU   1
  ****|||||||||||||||*||
targets:1518   CAUACCAAAACAAAACUUUGAA   1539

2.5 PREDICTED: Glycine max uncharacterized LOC102660841 (LOC102660841), transcript variant X2, mRNA uncharacterized LOC102660841(LOC102660841) coding protein psRNATarget
XM_006573080.2
ncRNA:22   CCCGGGUUUUGUUUUGAAAAUU   1
  ****|||||||||||||||*||
targets:1605   CAUACCAAAACAAAACUUUGAA   1626

2.5 PREDICTED: Glycine max uncharacterized LOC102660841 (LOC102660841), transcript variant X1, mRNA uncharacterized LOC102660841(LOC102660841) coding protein psRNATarget