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BaseInfo

ncRNA ID novel_gma_miR6294
Species Glycine max
Class miRNA
Genome position Chr12:16375344-16375431 [-]
Reference genome Glycine_max_v2.0
Source SRR1295520
Length 24
Mature sequence(if miRNA) 65 - UCAGCAACGUCUUUGAAAGUAGGC - 88
Stem-loop(if miRNA) --UC                          A      G  CUUA
    AGCAACGUCUUUGAAAGUAGGCAUUC AAGACG UG    C
    |||||||||||||||||||||||||| |||||| ||
    UCGUUGCAGAAACUUUCAUCCGUAAG UUCUGC AC    C
GGAA                          A      A  AACU
Stem-loop sequence UCAGCAACGUCUUUGAAAGUAGGCAUUCAAAGACGGUGCUUACCUCAACAACGUCUUAGAAUGCCUACUUUCAAAGACGUUGCUAAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014767162.1
ncRNA:24   CGGAUGAAAGUUUCUGCAACGACU   1
  **||==||*|*|||||||||||||
targets:2708   CACUGUUUGCCAAGACGUUGCUGA   2731

3.0 PREDICTED: Glycine max uncharacterized LOC102659507 (LOC102659507), transcript variant X4, mRNA uncharacterized LOC102659507(LOC102659507) coding protein psRNATarget
XM_014767161.1
ncRNA:24   CGGAUGAAAGUUUCUGCAACGACU   1
  **||==||*|*|||||||||||||
targets:2786   CACUGUUUGCCAAGACGUUGCUGA   2809

3.0 PREDICTED: Glycine max uncharacterized LOC102659507 (LOC102659507), transcript variant X3, mRNA uncharacterized LOC102659507(LOC102659507) coding protein psRNATarget
XM_014767160.1
ncRNA:24   CGGAUGAAAGUUUCUGCAACGACU   1
  **||==||*|*|||||||||||||
targets:3338   CACUGUUUGCCAAGACGUUGCUGA   3361

3.0 PREDICTED: Glycine max uncharacterized LOC102659507 (LOC102659507), transcript variant X2, mRNA uncharacterized LOC102659507(LOC102659507) coding protein psRNATarget
XM_006595971.2
ncRNA:24   CGGAUGAAAGUUUCUGCAACGACU   1
  **||==||*|*|||||||||||||
targets:3417   CACUGUUUGCCAAGACGUUGCUGA   3440

3.0 PREDICTED: Glycine max uncharacterized LOC102659507 (LOC102659507), transcript variant X1, mRNA uncharacterized LOC102659507(LOC102659507) coding protein psRNATarget