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BaseInfo

ncRNA ID novel_gma_miR6292
Species Glycine max
Class miRNA
Genome position Chr19:20801127-20801178 [-]
Reference genome Glycine_max_v2.0
Source SRR1295519;SRR1295525;SRR1451605
Length 24
Mature sequence(if miRNA) 29 - UCUUAAAUGCAUACGUCGGGCGCC - 52
Stem-loop(if miRNA) --     A     U    - G    CC
  UCUUA AUGCA ACGU C GGCG  A
  ||||| ||||| |||| | ||||
  AGAAU UAUGU UGUA G CCGU  U
GA     C     -    A A    UG
Stem-loop sequence UCUUAAAUGCAUACGUCGGGCGCCAUGUUGCCAGAAUGUUGUAUCUAAGAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003523641.3
ncRNA:24   CCGCGGGCUGCAUACGUAAAUUCU   1
  **=*|||*||*|||||||||||||
targets:2617   AUUUCCCAACUUAUGCAUUUAAGA   2640

2.0 PREDICTED: Glycine max G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 (LOC100782258), mRNA G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5(LOC100782258) coding protein psRNATarget