ncRNA ID | novel_gma_miR6285 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:34174838-34174899 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295519;SRR1295531 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGAAAAUCGUUAAGGCGUUGGACC - 24 |
Stem-loop(if miRNA) |
--  G   -   GA             A   U   UU GAC CUU  AAUGAUUUUCUCA GCU G   || ||| |||  ||||||||||||| |||   AG UUG GGA  UUGCUAAAAGAGU CGA A CC  G   C   -A             C   A |
Stem-loop sequence | UUGGACCUUGAAAUGAUUUUCUCAAGCUUGAAAGCCUGAGAAAAUCGUUAAGGCGUUGGACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003556783.3 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC100800818 (LOC100800818), transcript variant X4, mRNA | uncharacterized LOC100800818(LOC100800818) | coding protein | psRNATarget | |||||||||
XM_006605580.2 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC100800818 (LOC100800818), transcript variant X1, mRNA | uncharacterized LOC100800818(LOC100800818) | coding protein | psRNATarget |