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BaseInfo

ncRNA ID novel_gma_miR6285
Species Glycine max
Class miRNA
Genome position Chr1:34174838-34174899 [-]
Reference genome Glycine_max_v2.0
Source SRR1295519;SRR1295531
Length 24
Mature sequence(if miRNA) 1 - AGAAAAUCGUUAAGGCGUUGGACC - 24
Stem-loop(if miRNA) --  G   -   GA             A   U
  UU GAC CUU  AAUGAUUUUCUCA GCU G
  || ||| |||  ||||||||||||| |||
  AG UUG GGA  UUGCUAAAAGAGU CGA A
CC  G   C   -A             C   A
Stem-loop sequence UUGGACCUUGAAAUGAUUUUCUCAAGCUUGAAAGCCUGAGAAAAUCGUUAAGGCGUUGGACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003556783.3
ncRNA:24   CCAGGUUGCGGAAUUGCUAAAAGA   1
  **|||**|*|||||||||||||||
targets:84   UUUCCUUCUCCUUAACGAUUUUCU   107

3.0 PREDICTED: Glycine max uncharacterized LOC100800818 (LOC100800818), transcript variant X4, mRNA uncharacterized LOC100800818(LOC100800818) coding protein psRNATarget
XM_006605580.2
ncRNA:24   CCAGGUUGCGGAAUUGCUAAAAGA   1
  **|||**|*|||||||||||||||
targets:84   UUUCCUUCUCCUUAACGAUUUUCU   107

3.0 PREDICTED: Glycine max uncharacterized LOC100800818 (LOC100800818), transcript variant X1, mRNA uncharacterized LOC100800818(LOC100800818) coding protein psRNATarget