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BaseInfo

ncRNA ID novel_gma_miR6284
Species Glycine max
Class miRNA
Genome position Chr19:9394179-9394279 [+]
Reference genome Glycine_max_v2.0
Source SRR1295519
Length 24
Mature sequence(if miRNA) 78 - AUUAGGUGUUGGAAUUGGGGCAUC - 101
Stem-loop(if miRNA) --UGA G   -A            AA  CA     AUC      U  UC    U
     C CAA  UCAACACCUAAU  GU  CCCAU   AGGUAU GC  UGGG A
     | |||  ||||||||||||  ||  |||||   |||||| ||  |||| C
     G GUU  GGUUGUGGAUUA  CA  GGGUA   UCCAUA CG  ACCU A
CUACG G   AA            --  --     --A      -  UU    U
Stem-loop sequence UGACGCAAAUCAACACCUAAUAAGUCACCCAUAUCAGGUAUUGCUCUGGGUACAUUCCAUUGCAUACCUAAUGGGACAUUAGGUGUUGGAAUUGGGGCAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014775959.1
ncRNA:24   CUACGGGGUUAAGGUUGUGGAUUA   1
  *|||*|||||||||||||||||||
targets:862   CAUGGCCCAAUUCCAACACCUAAU   885

0.0 PREDICTED: Glycine max uncharacterized LOC102666791 (LOC102666791), mRNA uncharacterized LOC102666791(LOC102666791) coding protein psRNATarget
XM_006573103.2
ncRNA:24   CUACGGGGUUAAGGUUGUGGAUUA   1
  *|||*|||||||||||||||||||
targets:930   CAUGGCCCAAUUCCAACACCUAAU   953

0.0 PREDICTED: Glycine max uncharacterized LOC102666880 (LOC102666880), mRNA uncharacterized LOC102666880(LOC102666880) coding protein psRNATarget
XM_006573260.2
ncRNA:24   CUACGGGGUUAAGGUUGUGGAUUA   1
  *|||*|||||||||||||||||||
targets:947   CAUGGCCCAAUUCCAACACCUAAU   970

0.0 PREDICTED: Glycine max uncharacterized LOC102665301 (LOC102665301), mRNA uncharacterized LOC102665301(LOC102665301) coding protein psRNATarget
XM_014766071.1
ncRNA:24   CUACGGGGUUAAGGUUGUGGAUUA   1
  *|||*|||||||||||||||||||
targets:1765   CAUGGCCCAAUUCCAACACCUAAU   1788

0.0 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102661121), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102661121) coding protein psRNATarget
XM_014773283.1
ncRNA:24   CUACGGGGUUAAGGUUGUGGAUUA   1
  *|||*|||||||||||||||||||
targets:1780   CAUGGCCCAAUUCCAACACCUAAU   1803

0.0 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC106797965), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC106797965) coding protein psRNATarget
XM_006604879.2
ncRNA:24   CUACGGGGUUAAGGUUGUGGAUUA   1
  *|||*|||||||||||||||||||
targets:1780   CAUGGCCCAAUUCCAACACCUAAU   1803

0.0 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102661420), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102661420) coding protein psRNATarget
XM_006606283.2
ncRNA:24   CUACGGGGUUAAGGUUGUGGAUUA   1
  *|||*|||||||||||||||||||
targets:1780   CAUGGCCCAAUUCCAACACCUAAU   1803

0.0 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102668451), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102668451) coding protein psRNATarget
XM_014775097.1
ncRNA:24   CUACGGGGUUAAGGUUGUGGAUUA   1
  *|||*|||||||||||||||||||
targets:1303   CAUGGCCCAAUUCCAACACCUAAU   1326

0.0 PREDICTED: Glycine max uncharacterized LOC106798502 (LOC106798502), mRNA uncharacterized LOC106798502(LOC106798502) coding protein psRNATarget
XM_006577606.2
ncRNA:24   CUACGGGGUUAAGGUUGUGGAUUA   1
  *|||**||||||||||||||||||
targets:494   CAUGGGCCAAUUCCAACACCUAAU   517

1.0 PREDICTED: Glycine max uncharacterized LOC102669385 (LOC102669385), mRNA uncharacterized LOC102669385(LOC102669385) coding protein psRNATarget
XM_014775246.1
ncRNA:24   CUACGGGGUUAAGGUUGUGGAUUA   1
  *|||**||||||||||||||||||
targets:492   CAUGGGCCAAUUCCAACACCUAAU   515

1.0 PREDICTED: Glycine max uncharacterized LOC106798633 (LOC106798633), mRNA uncharacterized LOC106798633(LOC106798633) coding protein psRNATarget
XM_014763571.1
ncRNA:24   CUACGGGGUUAAGGUUGUGGAUUA   1
  *|||**||||||||||||||||||
targets:834   CAUGGGCCAAUUCCAACACCUAAU   857

1.0 PREDICTED: Glycine max uncharacterized LOC106794134 (LOC106794134), mRNA uncharacterized LOC106794134(LOC106794134) coding protein psRNATarget
XM_014761783.1
ncRNA:24   CUACGGGGUUAAGGUUGUGGAUUA   1
  *|||**||||||||||||||||||
targets:742   CAUGGGCCAAUUCCAACACCUAAU   765

1.0 PREDICTED: Glycine max uncharacterized LOC106794505 (LOC106794505), mRNA uncharacterized LOC106794505(LOC106794505) coding protein psRNATarget
XM_006601507.2
ncRNA:24   CUACGGGGUUAAGGUUGUGGAUUA   1
  *|||**||||||||||||||||||
targets:1039   CAUGGGCCAAUUCCAACACCUAAU   1062

1.0 PREDICTED: Glycine max uncharacterized LOC102659669 (LOC102659669), mRNA uncharacterized LOC102659669(LOC102659669) coding protein psRNATarget
XM_014774238.1
ncRNA:24   CUACGGGGUUAAGGUUGUGGAUUA   1
  *|||**||||||||||||||||||
targets:1081   CAUGGGCCAAUUCCAACACCUAAU   1104

1.0 PREDICTED: Glycine max uncharacterized LOC106798250 (LOC106798250), mRNA uncharacterized LOC106798250(LOC106798250) coding protein psRNATarget
XM_014770696.1
ncRNA:24   CUACGGGGUUAAGGUUGUGGAUUA   1
  *|||**||||||||||||||||||
targets:1342   CAUGGGCCAAUUCCAACACCUAAU   1365

1.0 PREDICTED: Glycine max uncharacterized LOC106797027 (LOC106797027), mRNA uncharacterized LOC106797027(LOC106797027) coding protein psRNATarget
XM_014761596.1
ncRNA:24   CUACGGGGUUAAGGUUGUGGAUUA   1
  *|||**||||||||||||||||||
targets:1238   CAUGGGCCAAUUCCAACACCUAAU   1261

1.0 PREDICTED: Glycine max uncharacterized LOC102668316 (LOC102668316), mRNA uncharacterized LOC102668316(LOC102668316) coding protein psRNATarget
XM_006598398.2
ncRNA:24   CUACGGGGUUAAGGUUGUGGAUUA   1
  *|||**||||||||||||||||||
targets:1654   CAUGGGCCAAUUCCAACACCUAAU   1677

1.0 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102667206), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102667206) coding protein psRNATarget
XM_014773707.1
ncRNA:24   CUACGGGGUUAAGGUUGUGGAUUA   1
  *|||**||||||||||||||||||
targets:1809   CAUGGGCCAAUUCCAACACCUAAU   1832

1.0 PREDICTED: Glycine max uncharacterized LOC102664795 (LOC102664795), mRNA uncharacterized LOC102664795(LOC102664795) coding protein psRNATarget
XM_014771292.1
ncRNA:24   CUACGGGGUUAAGGUUGUGGAUUA   1
  *|||**||||||||||||||||||
targets:1924   CAUGGGCCAAUUCCAACACCUAAU   1947

1.0 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102660673), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102660673) coding protein psRNATarget
XM_006593656.2
ncRNA:24   CUACGGGGUUAAGGUUGUGGAUUA   1
  *|||**||||||||||||||||||
targets:1954   CAUGGGCCAAUUCCAACACCUAAU   1977

1.0 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102663830), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102663830) coding protein psRNATarget
XM_014776022.1
ncRNA:24   CUACGGGGUUAAGGUUGUGGAUUA   1
  *|*|*=||||||||||||||||||
targets:745   CAGGGUCCAAUUCCAACACCUAAU   768

1.0 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC106798847), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC106798847) coding protein psRNATarget
XM_014778059.1
ncRNA:24   CUACGGGGUUAAGGUUGUGGAUUA   1
  ||||||||||||*||||||||||*
targets:1703   GAUGCCCCAAUUGCAACACCUAAC   1726

2.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102659357), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102659357) coding protein psRNATarget
XM_014771414.1
ncRNA:24   CUAC-GGGGUUAAGGUUGUGGAUUA   1
  ||*|-||||||*||||||||=||||
targets:1975   GAAGUCCCCAAAUCCAACACUUAAU   1999

2.5 PREDICTED: Glycine max histone acetyltransferase HAC12-like (LOC102664049), mRNA histone acetyltransferase HAC12-like(LOC102664049) coding protein psRNATarget
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