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BaseInfo

ncRNA ID novel_gma_miR6281
Species Glycine max
Class miRNA
Genome position Chr1:7786146-7786228 [+]
Reference genome Glycine_max_v2.0
Source SRR1295519
Length 23
Mature sequence(if miRNA) 1 - AUUUUAUGAUACGUCUUACAUGA - 23
Stem-loop(if miRNA) --       G  AC                GUC        C
  AUUUUAU AU  GUCUUACAUGAAAAUC   UUAGAAUG A
  ||||||| ||  ||||||||||||||||   ||||||||
  UAAGAUA UA  CAGAAUGUACUUUUGG   AAUCUUAC A
CG       G  CC                -GU        A
Stem-loop sequence AUUUUAUGAUACGUCUUACAUGAAAAUCGUCUUAGAAUGCAAACAUUCUAAUGGGUUUUCAUGUAAGACCCAUGAUAGAAUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003555996.3
ncRNA:23   AGUACAUUCUGCAUAGUAUUUUA   1
  *||||*|||*|||||||||||||
targets:46   ACAUGGAAGUCGUAUCAUAAAAU   68

2.0 PREDICTED: Glycine max primary amine oxidase-like (LOC100802589), mRNA primary amine oxidase-like(LOC100802589) coding protein psRNATarget