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BaseInfo

ncRNA ID novel_gma_miR6279
Species Glycine max
Class miRNA
Genome position Chr18:38210113-38210179 [+]
Reference genome Glycine_max_v2.0
Source SRR1295519
Length 24
Mature sequence(if miRNA) 1 - AUCUUCUAAUAAUCGUCUUUGAAU - 24
Stem-loop(if miRNA) --A   U                       UGU
   UCU CUAAUAAUCGUCUUUGAAUGUUG   C
   ||| |||||||||||||||||||||||   U
   AGA GAUUAUUGGCAGAAACUUACAGU   G
AAG   U                       UUA
Stem-loop sequence AUCUUCUAAUAAUCGUCUUUGAAUGUUGUGUCUGAUUUGACAUUCAAAGACGGUUAUUAGUAGAGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003547907.3
ncRNA:24   UAA--GUUUCUGCUAAUAAUCUUCUA   1
  |||--=|||||*|||*||||||||||
targets:910   AUUACUAAAGAAGAUCAUUAGAAGAU   935

2.5 PREDICTED: Glycine max aldehyde dehydrogenase family 3 member F1-like (LOC100808513), mRNA aldehyde dehydrogenase family 3 member F1-like(LOC100808513) coding protein psRNATarget