ncRNA ID | novel_gma_miR6277 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:12750597-12750775 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295519 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CUAGGAGGAUGAUGAGAUGGACCU - 24 |
Stem-loop(if miRNA) |
---G  -     AC    UG         UU         ---------GU   U   --UAUUCCU        AAUCA    UC   UA     UC  G     CC UUUCA  CAUU  CUUAGCUAA  GGCCCACCU           ACC CCA         GAUUGCUG     GUAC  UUC  GUGUG  AC U     || |||||  ||||  |||||||||  |||||||||           ||| |||         ||||||||     ||||  |||  |||||  ||     GG AGAGU  GUAG  GGAUCGGUU  UUGGGUGGG           UGG GGU         UUAACGAC     CAUG  AAG  UACGU  UG U UCCA  U     -A    GA         -C         AUGUCCUCUUU   U   UCGUCCUCC        -----    UC   --     -C  A |
Stem-loop sequence | GCCUUUCAACCAUUUGCUUAGCUAAUUGGCCCACCUGUACCUCCAUAUUCCUGAUUGCUGAAUCAGUACUCUUCUAGUGUGUCACGUUAGUCUGCAUGAACUGUACCAGCAAUUCCUCCUGCUUGGUGGUUUUCUCCUGUAGGGUGGGUUCUUGGCUAGGAGGAUGAUGAGAUGGACCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006606798.1 |
|
2.0 | PREDICTED: Glycine max uncharacterized LOC102668223 (LOC102668223), mRNA | uncharacterized LOC102668223(LOC102668223) | coding protein | psRNATarget |