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BaseInfo

ncRNA ID	novel_gma_miR6266
Species	Glycine max
Class	miRNA
Genome position	Chr2:9512839-9513029 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1292925
Length	24
Mature sequence(if miRNA)	1 - ACUUAUUGGACUUGGUGCGUGAAC - 24
Stem-loop(if miRNA)	--    A    A              C         A A    C     ----         --GAA     --   CC  AGAUUAGAACCUGCUUUGA   ACUU UUGG CUUGGUGCGUGAAC ACAGAUGGU G UGCU GUCGC    AGCGGAAGC     GGCGA  GGU  CA                   U   |||| |||| |||||||||||||| ||||||||| | |||| |||||    |||||||||     |||||  |||  ||                   A   UGAA AACC GAACUACGCACUUG UGUUUACCA C ACGA CAGUG    UCGCUUUUG     CCGUU  CUA  AA                   C CG    G    C              U         C C    A     GUGU         AAUUA     AA   --  AUUCUACUUUAGAUUGUAC
Stem-loop sequence	ACUUAUUGGACUUGGUGCGUGAACCACAGAUGGUAGAUGCUCGUCGCAGCGGAAGCGAAGGCGAGGUCCCAAGAUUAGAACCUGCUUUGAUACCAUGUUAGAUUUCAUCUUAAAAUCAAUUGCCAUUAAGUUUUCGCUUGUGGUGACAAGCACCCACCAUUUGUUGUUCACGCAUCAAGCCCAAGAAGUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014763615.1	ncRNA:24   CAAGUGCGUGGUUCAGGUUAUUCA   1   ||||||||||||||*||||||||| targets:73   GUUCACGCACCAAGCCCAAUAAGU   96 Target Full Sequence	1.5	PREDICTED: Glycine max putative phospholipid:diacylglycerol acyltransferase 2 (LOC106794309), mRNA	putative phospholipid:diacylglycerol acyltransferase 2(LOC106794309)	coding protein	psRNATarget
XM_014764144.1	ncRNA:24   CAAGUGCGUGGUUCAGGUUAUUCA   1   ||||||||||||||*||||||||| targets:3585   GUUCACGCACCAAGCCCAAUAAGU   3608 Target Full Sequence	1.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At5g66500, mitochondrial-like (LOC100797438), transcript variant X3, mRNA	pentatricopeptide repeat-containing protein At5g66500, mitochondrial-like(LOC100797438)	coding protein	psRNATarget
XM_014764142.1	ncRNA:24   CAAGUGCGUGGUUCAGGUUAUUCA   1   ||||||||||||||*||||||||| targets:3585   GUUCACGCACCAAGCCCAAUAAGU   3608 Target Full Sequence	1.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At5g66500, mitochondrial-like (LOC100797438), transcript variant X1, mRNA	pentatricopeptide repeat-containing protein At5g66500, mitochondrial-like(LOC100797438)	coding protein	psRNATarget
XM_014764143.1	ncRNA:24   CAAGUGCGUGGUUCAGGUUAUUCA   1   ||||||||||||||*||||||||| targets:3585   GUUCACGCACCAAGCCCAAUAAGU   3608 Target Full Sequence	1.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At5g66500, mitochondrial-like (LOC100797438), transcript variant X2, mRNA	pentatricopeptide repeat-containing protein At5g66500, mitochondrial-like(LOC100797438)	coding protein	psRNATarget