ncRNA ID | novel_gma_miR6262 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:36609785-36609895 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295519 |
Length | 24 |
Mature sequence(if miRNA) | 88 - UUGAGAAUUCUGAGACGGUUUUGC - 111 |
Stem-loop(if miRNA) |
--UUGAGAA               GCACA      G  U      -A   U   UA          UUCUGAGACGGUUUU     AAAAUA UC UAGAAU  UUA UUU  A          |||||||||||||||     |||||| || ||||||  ||| |||  A          AAGAUUCUGCCAAAA     UUUUGU AG AUCUUA  AAU AAA  A GUAACAUAA               ACCUA      -  C      GG   U   CA |
Stem-loop sequence | UUGAGAAUUCUGAGACGGUUUUGCACAAAAAUAGUCUUAGAAUAUUAUUUUUAAAAACAAAUUAAGGAUUCUACGAUGUUUUAUCCAAAAACCGUCUUAGAAAAUACAAUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014762012.1 |
|
2.5 | PREDICTED: Glycine max FAM206 family protein CG9288-like (LOC100819401), transcript variant X1, mRNA | FAM206 family protein CG9288-like(LOC100819401) | coding protein | psRNATarget | |||||||||
XM_014769324.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100811569 (LOC100811569), transcript variant X1, mRNA | uncharacterized LOC100811569(LOC100811569) | coding protein | psRNATarget |