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BaseInfo

ncRNA ID novel_gma_miR6262
Species Glycine max
Class miRNA
Genome position Chr10:36609785-36609895 [-]
Reference genome Glycine_max_v2.0
Source SRR1295519
Length 24
Mature sequence(if miRNA) 88 - UUGAGAAUUCUGAGACGGUUUUGC - 111
Stem-loop(if miRNA) --UUGAGAA               GCACA      G  U      -A   U   UA
         UUCUGAGACGGUUUU     AAAAUA UC UAGAAU  UUA UUU  A
         |||||||||||||||     |||||| || ||||||  ||| |||  A
         AAGAUUCUGCCAAAA     UUUUGU AG AUCUUA  AAU AAA  A
GUAACAUAA               ACCUA      -  C      GG   U   CA
Stem-loop sequence UUGAGAAUUCUGAGACGGUUUUGCACAAAAAUAGUCUUAGAAUAUUAUUUUUAAAAACAAAUUAAGGAUUCUACGAUGUUUUAUCCAAAAACCGUCUUAGAAAAUACAAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014762012.1
ncRNA:24   CGUUUUGGCAGAGUCUUAAGAGUU   1
  **|=|||=||||=|||||||||||
targets:1816   AAAGAACUGUCUUAGAAUUCUCAA   1839

2.5 PREDICTED: Glycine max FAM206 family protein CG9288-like (LOC100819401), transcript variant X1, mRNA FAM206 family protein CG9288-like(LOC100819401) coding protein psRNATarget
XM_014769324.1
ncRNA:24   CGUUUUGGCAGAGUCUUAAGAGUU   1
  *||=*||||*||*|||||||||||
targets:1278   CCAGCACCGGCUGAGAAUUCUCAA   1301

2.5 PREDICTED: Glycine max uncharacterized LOC100811569 (LOC100811569), transcript variant X1, mRNA uncharacterized LOC100811569(LOC100811569) coding protein psRNATarget