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BaseInfo

ncRNA ID novel_gma_miR6258
Species Glycine max
Class miRNA
Genome position Chr15:28920337-28920401 [+]
Reference genome Glycine_max_v2.0
Source SRR1295519
Length 24
Mature sequence(if miRNA) 1 - UUUUGGAUAGUAUGUCAAGGGCCU - 24
Stem-loop(if miRNA) --UU         ---         G  UAUGUU
    UUGGAUAGU   AUGUCAAGG CC      G
    |||||||||   ||||||||| ||      U
    AGCUUGUCA   UAUAGUUUC GG      G
GUCU         AUC         -  UGUUUA
Stem-loop sequence UUUUGGAUAGUAUGUCAAGGGCCUAUGUUGUGAUUUGUGGCUUUGAUAUCUAACUGUUCGAUCUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006584586.2
ncRNA:24   UCCGGGAACUGUAUGAUAGGUUUU   1
  |**|||||*|||||=|||||||||
targets:1329   AAACCCUUAACAUAUUAUCCAAAA   1352

2.5 PREDICTED: Glycine max protein trichome birefringence-like 16 (LOC102666240), transcript variant X2, mRNA protein trichome birefringence-like 16(LOC102666240) coding protein psRNATarget
XM_006584585.2
ncRNA:24   UCCGGGAACUGUAUGAUAGGUUUU   1
  |**|||||*|||||=|||||||||
targets:1338   AAACCCUUAACAUAUUAUCCAAAA   1361

2.5 PREDICTED: Glycine max protein trichome birefringence-like 16 (LOC102666240), transcript variant X1, mRNA protein trichome birefringence-like 16(LOC102666240) coding protein psRNATarget