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BaseInfo

ncRNA ID novel_gma_miR6252
Species Glycine max
Class miRNA
Genome position Chr14:3342010-3342099 [+]
Reference genome Glycine_max_v2.0
Source SRR1295519
Length 24
Mature sequence(if miRNA) 67 - CCAAUCAGAACAUGACACGUGGCA - 90
Stem-loop(if miRNA) --    A      A          AUGUCA  -  CAUGAAAGAUGGA
  CCAC UGUCAU UUCUGAUUGG      AU UC             A
  |||| |||||| ||||||||||      || ||
  GGUG ACAGUA AAGACUAACC      GU AC             U
AC    C      C          -----A  U  UUUUGUUGUUACG
Stem-loop sequence CCACAUGUCAUAUUCUGAUUGGAUGUCAAUUCCAUGAAAGAUGGAAUGCAUUGUUGUUUUCAUUGACCAAUCAGAACAUGACACGUGGCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003518407.3
ncRNA:24   ACGGUGCACAGUACAAGACUAACC   1
  ||=|||||||||*|||||||||||
targets:1637   UGUCACGUGUCACGUUCUGAUUGG   1660

1.5 PREDICTED: Glycine max UPF0481 protein At3g47200-like (LOC100803577), mRNA UPF0481 protein At3g47200-like(LOC100803577) coding protein psRNATarget