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BaseInfo

ncRNA ID novel_gma_miR6234
Species Glycine max
Class miRNA
Genome position Chr8:36819718-36819798 [-]
Reference genome Glycine_max_v2.0
Source SRR1295519
Length 24
Mature sequence(if miRNA) 58 - AGAGAGAAAUAGGGUUGAGAGGCU - 81
Stem-loop(if miRNA) --         -UAG   U      --C    -     CAUUC
  AGAGAGAAA    GGU GAGAGG   UGGA GAAGA     U
  |||||||||    ||| ||||||   |||| |||||
  UCUUUUUUU    CCA CUUUCC   ACCU CUUCU     C
UU         UAAA   -      UUU    U     ACUUC
Stem-loop sequence AGAGAGAAAUAGGGUUGAGAGGCUGGAGAAGACAUUCUCCUUCAUCUUCUUCCAUUUCCUUUCACCAAAUUUUUUUUCUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT093303.1
ncRNA:24   UCGGAGAGUUGGGAUAAAGAGAGA   1
  **|||||**|||||||||||||||
targets:1201   CUCCUCUACACCCUAUUUCUCUCU   1224

2.0 Soybean clone JCVI-FLGm-17I11 unknown mRNA NA coding protein psRNATarget
XM_003537683.3
ncRNA:24   UCGGAGAGUUGGGAUAAAGAGAGA   1
  **|||||**|||||||||||||||
targets:2004   CUCCUCUACACCCUAUUUCUCUCU   2027

2.0 PREDICTED: Glycine max NAD(H) kinase 1 (LOC100806276), mRNA NAD(H) kinase 1(LOC100806276) coding protein psRNATarget
XM_003535564.3
ncRNA:24   UCGGAGAGUUGGGAUAAAGAGAGA   1
  |*=*|||=|||||||*||||||||
targets:1487   AUUGUCUUAACCCUACUUCUCUCU   1510

2.5 PREDICTED: Glycine max cytokinin hydroxylase-like (LOC100803409), mRNA cytokinin hydroxylase-like(LOC100803409) coding protein psRNATarget