ncRNA ID | novel_gma_miR6221 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr6:37638109-37638171 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295519;SRR1295521 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUUUGGAUAGUAUGUCAAGGGCCU - 24 |
Stem-loop(if miRNA) |
UU  G      ---         GC     CUG   UU GAUAGU   AUGUCAAGG  CUAUG   U   || ||||||   |||||||||  |||||   AG UUAUUA   UAUAGUUCC  GAUAU   G AU  G      AUC         --     CUA |
Stem-loop sequence | UUUUGGAUAGUAUGUCAAGGGCCUAUGCUGUGAUCUAUAGCCUUGAUAUCUAAUUAUUGGAUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006584586.2 |
|
2.5 | PREDICTED: Glycine max protein trichome birefringence-like 16 (LOC102666240), transcript variant X2, mRNA | protein trichome birefringence-like 16(LOC102666240) | coding protein | psRNATarget | |||||||||
XM_006584585.2 |
|
2.5 | PREDICTED: Glycine max protein trichome birefringence-like 16 (LOC102666240), transcript variant X1, mRNA | protein trichome birefringence-like 16(LOC102666240) | coding protein | psRNATarget |