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BaseInfo

ncRNA ID novel_gma_miR6221
Species Glycine max
Class miRNA
Genome position Chr6:37638109-37638171 [+]
Reference genome Glycine_max_v2.0
Source SRR1295519;SRR1295521
Length 24
Mature sequence(if miRNA) 1 - UUUUGGAUAGUAUGUCAAGGGCCU - 24
Stem-loop(if miRNA) UU  G      ---         GC     CUG
  UU GAUAGU   AUGUCAAGG  CUAUG   U
  || ||||||   |||||||||  |||||
  AG UUAUUA   UAUAGUUCC  GAUAU   G
AU  G      AUC         --     CUA
Stem-loop sequence UUUUGGAUAGUAUGUCAAGGGCCUAUGCUGUGAUCUAUAGCCUUGAUAUCUAAUUAUUGGAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006584586.2
ncRNA:24   UCCGGGAACUGUAUGAUAGGUUUU   1
  |**|||||*|||||=|||||||||
targets:1329   AAACCCUUAACAUAUUAUCCAAAA   1352

2.5 PREDICTED: Glycine max protein trichome birefringence-like 16 (LOC102666240), transcript variant X2, mRNA protein trichome birefringence-like 16(LOC102666240) coding protein psRNATarget
XM_006584585.2
ncRNA:24   UCCGGGAACUGUAUGAUAGGUUUU   1
  |**|||||*|||||=|||||||||
targets:1338   AAACCCUUAACAUAUUAUCCAAAA   1361

2.5 PREDICTED: Glycine max protein trichome birefringence-like 16 (LOC102666240), transcript variant X1, mRNA protein trichome birefringence-like 16(LOC102666240) coding protein psRNATarget