ncRNA ID | novel_gma_miR6219 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr6:27819582-27819638 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295519;SRR1292928 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAUCGUGAUUUUGUUGGCUUGCC - 24 |
Stem-loop(if miRNA) |
--                --GG    CCA   AAAUCGUGAUUUUGUU    CUUG   A   ||||||||||||||||    ||||   A   UUUAGCACUAAAACAA    GAGC   A AC                AAAA    UUA |
Stem-loop sequence | AAAUCGUGAUUUUGUUGGCUUGCCAAAAAUUCGAGAAAAAACAAAAUCACGAUUUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003524385.3 |
|
2.5 | PREDICTED: Glycine max F-box protein SKIP8 (LOC100807571), mRNA | F-box protein SKIP8(LOC100807571) | coding protein | psRNATarget | |||||||||
XM_003542910.3 |
|
2.5 | PREDICTED: Glycine max RNA-binding KH domain-containing protein PEPPER-like (LOC100802089), transcript variant X1, mRNA | RNA-binding KH domain-containing protein PEPPER-like(LOC100802089) | coding protein | psRNATarget |