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BaseInfo

ncRNA ID novel_gma_miR6217
Species Glycine max
Class miRNA
Genome position Chr6:4705089-4705168 [-]
Reference genome Glycine_max_v2.0
Source SRR1295519
Length 23
Mature sequence(if miRNA) 1 - CGUGCUCACUUCUCUUUCUGUCA - 23
Stem-loop(if miRNA) --      -    -        A        CU       G
  ACAGAA GAGA GUGAGCAC CAGAGGCA  UGGUAUA U
  |||||| |||| |||||||| ||||||||  ||||||| A
  UGUCUU CUCU CACUCGUG GUUUUCGU  AUCAUAU U
AC      U    U        C        -U       A
Stem-loop sequence ACAGAAGAGAGUGAGCACACAGAGGCACUUGGUAUAGUAUAUAUACUAUUGCUUUUGCGUGCUCACUUCUCUUUCUGUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ242597.1
ncRNA:23   ACUGUCUUUCUCUUCACUCGUGC   1
  *|||||||||||*|||||||||*
targets:9   CGACAGAAAGAGUAGUGAGCACA   31

2.5 Sequence 8592 from Patent EP2985353 NA coding protein psRNATarget
JB170928.1
ncRNA:23   ACUGUCUUUCUCUUCACUCGUGC   1
  *|||||||||||*|||||||||*
targets:9   CGACAGAAAGAGUAGUGAGCACA   31

2.5 Sequence 8592 from Patent EP2559767 NA coding protein psRNATarget
HI410467.1
ncRNA:23   ACUGUCUUUCUCUUCACUCGUGC   1
  *|||||||||||*|||||||||*
targets:9   CGACAGAAAGAGUAGUGAGCACA   31

2.5 Sequence 8592 from Patent EP2074227 NA coding protein psRNATarget